PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Sphfalx0022s0081.6.p

Organism

Sphagnum fallax

Taxonomic ID

53036

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum

Family

bHLH

Protein Properties

Length: 750aa MW: 80714.5 Da PI: 5.9586

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Sphfalx0022s0081.6.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	24.4	5.4e-08	502	547	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h +Er RR + ++++++L +++P+ K + ++L+ +++YI+ L Sphfalx0022s0081.6.p 502 QKHMLAERDRRFKFKEKIHTLCSIVPTT------KKDNLSVLTNTIDYIRRL 547 57999********************9......777899********98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	7.07E-11	495	556	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profile	PS50888	9.674	499	547	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	8.8E-6	502	547	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	1.07E-7	502	552	No hit	No description
Gene3D	G3DSA:4.10.280.10	5.6E-11	503	556	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	4.9E-7	505	553	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 750 aa Download sequence Send to blast
MATSGAAAAS ELAGHGDNVE FNWEERFQAL VQNWSWIDYI VVWKLNPHTP ALVWHRGYFN 60 DRSSSFHPEY SRRIAPIFSS IYRSCVFRSS NSGYAARAVY EQAPLWWTSN QPRLPTDERK 120 DQFLQELGIK TIVCLPGLGT DGNMYCLELA STQLKQESSG MLQALLAFAS GSREQQLLAA 180 GLDEEELAVA QQQQENIQLE SVSTPSSDAE AAGGVPTDMM LNLWASMSDI DDAQMQMSSF 240 MQRSTLDSLV MAHDIMQIGQ PPAAAAATMF GTTTQYPAMP VSATPAFHNV LPYHQLPGQH 300 QSASTPYQRM ETPELSAAST TALEAAPSSS MNRLQAAGLP LAPADPSSHV RQGMLAQLAG 360 DTRMPPAGSA RAVDQQLGNP SESTVRSRAA AVSLHSPFKS FEPISRHPKL RRLDDSRDTG 420 NIAGPSKPRQ PMIELWIKDL CPRIQESDRM KRRLQLGATV AGSSMNPAGA AGGSFMQGDT 480 HVSADQQYYS PGWIEEQAQI AQKHMLAERD RRFKFKEKIH TLCSIVPTTK KDNLSVLTNT 540 IDYIRRLKEQ IAGLEMAGST STAAASTHDP AVLQAPAVTS SAGPSSSTAA AELAQAQQQL 600 RSEAAAAATT HPSSSSINNT TTVAVSWRQF ELAGTEAAGA HGAMRAGTNT GISSNAAGQL 660 VIEVETPYNN PQSLIQVLSV VQDLGLDLDS LSSGNLNNGR MQISVRVLAP AGSSSSQQLI 720 QLSSVVKEKL ETMLALDSRN TPSTTSEMQ*

Sequence ? help Back to Top

Protein Sequence Length: 750 aa Download sequence Send to blast

MATSGAAAAS ELAGHGDNVE FNWEERFQAL VQNWSWIDYI VVWKLNPHTP ALVWHRGYFN  60
DRSSSFHPEY SRRIAPIFSS IYRSCVFRSS NSGYAARAVY EQAPLWWTSN QPRLPTDERK  120
DQFLQELGIK TIVCLPGLGT DGNMYCLELA STQLKQESSG MLQALLAFAS GSREQQLLAA  180
GLDEEELAVA QQQQENIQLE SVSTPSSDAE AAGGVPTDMM LNLWASMSDI DDAQMQMSSF  240
MQRSTLDSLV MAHDIMQIGQ PPAAAAATMF GTTTQYPAMP VSATPAFHNV LPYHQLPGQH  300
QSASTPYQRM ETPELSAAST TALEAAPSSS MNRLQAAGLP LAPADPSSHV RQGMLAQLAG  360
DTRMPPAGSA RAVDQQLGNP SESTVRSRAA AVSLHSPFKS FEPISRHPKL RRLDDSRDTG  420
NIAGPSKPRQ PMIELWIKDL CPRIQESDRM KRRLQLGATV AGSSMNPAGA AGGSFMQGDT  480
HVSADQQYYS PGWIEEQAQI AQKHMLAERD RRFKFKEKIH TLCSIVPTTK KDNLSVLTNT  540
IDYIRRLKEQ IAGLEMAGST STAAASTHDP AVLQAPAVTS SAGPSSSTAA AELAQAQQQL  600
RSEAAAAATT HPSSSSINNT TTVAVSWRQF ELAGTEAAGA HGAMRAGTNT GISSNAAGQL  660
VIEVETPYNN PQSLIQVLSV VQDLGLDLDS LSSGNLNNGR MQISVRVLAP AGSSSSQQLI  720
QLSSVVKEKL ETMLALDSRN TPSTTSEMQ*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28800.1	4e-07	bHLH family protein

Link Out ? help Back to Top
Phytozome	Sphfalx0022s0081.6.p