PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Sphfalx0022s0081.4.p

Organism

Sphagnum fallax

Taxonomic ID

53036

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum

Family

bHLH

Protein Properties

Length: 751aa MW: 80870.6 Da PI: 6.0703

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Sphfalx0022s0081.4.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	24.4	5.4e-08	503	548	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h +Er RR + ++++++L +++P+ K + ++L+ +++YI+ L Sphfalx0022s0081.4.p 503 QKHMLAERDRRFKFKEKIHTLCSIVPTT------KKDNLSVLTNTIDYIRRL 548 57999********************9......777899********98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	7.07E-11	496	557	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profile	PS50888	9.674	500	548	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	1.07E-7	503	553	No hit	No description
Pfam	PF00010	8.9E-6	503	548	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	5.6E-11	504	557	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	4.9E-7	506	554	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 751 aa Download sequence Send to blast
MATSGAAAAS ELAGHGDNVE FNWEERFQAL VQNWSWIDYI VVWKLNPHTP RALVWHRGYF 60 NDRSSSFHPE YSRRIAPIFS SIYRSCVFRS SNSGYAARAV YEQAPLWWTS NQPRLPTDER 120 KDQFLQELGI KTIVCLPGLG TDGNMYCLEL ASTQLKQESS GMLQALLAFA SGSREQQLLA 180 AGLDEEELAV AQQQQENIQL ESVSTPSSDA EAAGGVPTDM MLNLWASMSD IDDAQMQMSS 240 FMQRSTLDSL VMAHDIMQIG QPPAAAAATM FGTTTQYPAM PVSATPAFHN VLPYHQLPGQ 300 HQSASTPYQR METPELSAAS TTALEAAPSS SMNRLQAAGL PLAPADPSSH VRQGMLAQLA 360 GDTRMPPAGS ARAVDQQLGN PSESTVRSRA AAVSLHSPFK SFEPISRHPK LRRLDDSRDT 420 GNIAGPSKPR QPMIELWIKD LCPRIQESDR MKRRLQLGAT VAGSSMNPAG AAGGSFMQGD 480 THVSADQQYY SPGWIEEQAQ IAQKHMLAER DRRFKFKEKI HTLCSIVPTT KKDNLSVLTN 540 TIDYIRRLKE QIAGLEMAGS TSTAAASTHD PAVLQAPAVT SSAGPSSSTA AAELAQAQQQ 600 LRSEAAAAAT THPSSSSINN TTTVAVSWRQ FELAGTEAAG AHGAMRAGTN TGISSNAAGQ 660 LVIEVETPYN NPQSLIQVLS VVQDLGLDLD SLSSGNLNNG RMQISVRVLA PAGSSSSQQL 720 IQLSSVVKEK LETMLALDSR NTPSTTSEMQ *

Sequence ? help Back to Top

Protein Sequence Length: 751 aa Download sequence Send to blast

MATSGAAAAS ELAGHGDNVE FNWEERFQAL VQNWSWIDYI VVWKLNPHTP RALVWHRGYF  60
NDRSSSFHPE YSRRIAPIFS SIYRSCVFRS SNSGYAARAV YEQAPLWWTS NQPRLPTDER  120
KDQFLQELGI KTIVCLPGLG TDGNMYCLEL ASTQLKQESS GMLQALLAFA SGSREQQLLA  180
AGLDEEELAV AQQQQENIQL ESVSTPSSDA EAAGGVPTDM MLNLWASMSD IDDAQMQMSS  240
FMQRSTLDSL VMAHDIMQIG QPPAAAAATM FGTTTQYPAM PVSATPAFHN VLPYHQLPGQ  300
HQSASTPYQR METPELSAAS TTALEAAPSS SMNRLQAAGL PLAPADPSSH VRQGMLAQLA  360
GDTRMPPAGS ARAVDQQLGN PSESTVRSRA AAVSLHSPFK SFEPISRHPK LRRLDDSRDT  420
GNIAGPSKPR QPMIELWIKD LCPRIQESDR MKRRLQLGAT VAGSSMNPAG AAGGSFMQGD  480
THVSADQQYY SPGWIEEQAQ IAQKHMLAER DRRFKFKEKI HTLCSIVPTT KKDNLSVLTN  540
TIDYIRRLKE QIAGLEMAGS TSTAAASTHD PAVLQAPAVT SSAGPSSSTA AAELAQAQQQ  600
LRSEAAAAAT THPSSSSINN TTTVAVSWRQ FELAGTEAAG AHGAMRAGTN TGISSNAAGQ  660
LVIEVETPYN NPQSLIQVLS VVQDLGLDLD SLSSGNLNNG RMQISVRVLA PAGSSSSQQL  720
IQLSSVVKEK LETMLALDSR NTPSTTSEMQ *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28800.1	4e-07	bHLH family protein

Link Out ? help Back to Top
Phytozome	Sphfalx0022s0081.4.p