PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0020s0020.1.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family ERF
Protein Properties Length: 560aa    MW: 59106.9 Da    PI: 5.7552
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0020s0020.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.96e-1975124356
                   AP2   3 ykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkklege 56 
                           ++GVr++  +grWvAeIr+p     r  +r +lg+f ta eAa+a+++a+++++g+
  Sphfalx0020s0020.1.p  75 FRGVRQRQ-WGRWVAEIREP-----RlrTRMWLGTFATAIEAARAYDEAALAYHGP 124
                           8****999.**********9.....445**************************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103221.25974131IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.6E-2774132IPR001471AP2/ERF domain
SMARTSM003801.5E-3074137IPR001471AP2/ERF domain
SuperFamilySSF541714.25E-1974132IPR016177DNA-binding domain
CDDcd000181.00E-2775131No hitNo description
PRINTSPR003678.3E-97586IPR001471AP2/ERF domain
PfamPF008472.1E-1275123IPR001471AP2/ERF domain
PRINTSPR003678.3E-997113IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 560 aa     Download sequence    Send to blast
MVPLPSLQQT PDVATKKRAG TRKRERDNIV HDENVRQEGG GGGTGGGAAG RCSARSRGAG  60
TRPRRGGPEN GLHTFRGVRQ RQWGRWVAEI REPRLRTRMW LGTFATAIEA ARAYDEAALA  120
YHGPGAHLNL QRSAACNTSG SAVLESKKTE AQGERSDGLL SGTKPGIAGA NTDRCAAAAA  180
VSSVITGTSL GGVKSSTRVG MSSAAAHSIE PLQPLSRNIL PEVQGLPRVP ISCDDVGDCR  240
FNTLLYRPDL RGSPAGSLVL GRDGSRFGAE NLSAFFEDQR RLSAANSLVH NDLPAVSTFS  300
AAPAAGAVSS SNGYVAAEGQ ISHRSDGEGL WAPPAPIWHP GTGFPSMGLS TDHTALLQSP  360
ISSLVTMHSA SSCVSSCEPR QLPHLKLERQ EIAESMNMMK RSFTGATPTL FASPTSTNSS  420
NALDELRAVV SQLPLSSIRS EAELEHSPEY SSIVSSTNSS GETQLLAGEN NICGMEDSSS  480
PATSFSWELD AAVADHHVVD SQTPLIEPAG APNDPWMIQE MLEEPASLMG TWGPEDLIIP  540
PPLDLSSLDE PLLDEIFLR*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G46768.11e-15related to AP2 1