PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0007s0227.1.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family ERF
Protein Properties Length: 688aa    MW: 73940.1 Da    PI: 6.3498
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0007s0227.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.23.7e-17236286155
                   AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                           + y+GVr++  +g Wv eIr p++   ++r++lg+f +ae+Aa+a++aa+++l+g
  Sphfalx0007s0227.1.p 236 PVYRGVRRRQ-WGIWVTEIRRPKK---KTRIWLGSFASAEMAARAYDAAALALRG 286
                           68*****887.**********854...6*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008475.3E-12236286IPR001471AP2/ERF domain
PROSITE profilePS5103223.13237294IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.9E-29237295IPR001471AP2/ERF domain
SuperFamilySSF541712.09E-19237295IPR016177DNA-binding domain
SMARTSM003808.2E-32237300IPR001471AP2/ERF domain
PRINTSPR003671.0E-10238249IPR001471AP2/ERF domain
CDDcd000187.65E-16238294No hitNo description
PRINTSPR003671.0E-10276296IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 688 aa     Download sequence    Send to blast
MVEKASSFSS SRRSRAALMI NLSRAASWII DGAGEVAETS AGGPSTYVGW AHSNLEHVLT  60
GHIEVELGDA ADSLAAATPT QEAGSWGESA YLQSPRNLCH TLIGSWVLPC RPHGGGDDQL  120
QLPCPPFMSL ESPSPGRRSS RRRENSDQSE EEYLGGLGQS LLQGCEQSIS PEHFWEPGSE  180
SRVLSCEQEP RRMQQAAAEL SEAVEASSSP PSHVSEDQLV AKRWKVSSAV QDTRHPVYRG  240
VRRRQWGIWV TEIRRPKKKT RIWLGSFASA EMAARAYDAA ALALRGPAAL LNFPGSADSL  300
PRPADLSDKS IQAAATAAAN ISAISTPRSA SPAKTVPAHE MPRANENTGV GSSSRITTSP  360
PHRPQQFEFP STANTKKLTS CNVLSCPTGL ERRSYPSSSS AVPMIPSSSS SAKKVEGTRF  420
AMSPRGDQPP RIGDIASTPS TAGSTAAAER SRSTPKAERG KEQLSVSQCS LAPAARSCRM  480
LLPEVIGSTT VSANTLHGFS SSHIFATLPH DATLDLQGSH HRNDVMAMPP AAGRTLVSEE  540
LPDSVTYVTR IPIDGPTTHV SAVEERNKEK LSNTRQEDLE STVAAQSSDQ PLIMSKHITT  600
VTELQQQQVA QIVTDAVDEA ELANFHMMPN VQAQQQQLSN MYNAMGLSPP IITFMRNDLP  660
DHNINTDGHN SDDEDSNSYG DSQLWSF*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A5e-162352941272Ethylene-responsive transcription factor ERF096
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.11e-18ERF family protein