PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0005s0163.1.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family ERF
Protein Properties Length: 321aa    MW: 34833.8 Da    PI: 5.0766
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0005s0163.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.11.7e-1678128155
                   AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                           + y+GVr+++ +g Wv eIr p++   + r++lg+f ++e+Aa a++ a+++l+g
  Sphfalx0005s0163.1.p  78 PVYRGVRRRS-WGIWVTEIRRPKT---KSRIWLGSFASPEMAALAYDTAALALRG 128
                           68*****887.**********954...5*************************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008477.0E-1178128IPR001471AP2/ERF domain
PROSITE profilePS5103222.11579136IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.3E-2879137IPR001471AP2/ERF domain
SuperFamilySSF541717.19E-1979136IPR016177DNA-binding domain
SMARTSM003802.1E-3179142IPR001471AP2/ERF domain
PRINTSPR003671.6E-118091IPR001471AP2/ERF domain
CDDcd000181.75E-2780136No hitNo description
PRINTSPR003671.6E-11118138IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    Send to blast
MSRDLTLEVL QLSSSSRDRA MKDELDLPSP DAGSSCEREL QQQIDSAGCE SSNKVELEAR  60
GKKARTNFNG EGGETRHPVY RGVRRRSWGI WVTEIRRPKT KSRIWLGSFA SPEMAALAYD  120
TAALALRGPA AVLNFPKLAS SIPRPLDLSD KSIQAAASDA ANSGFYRARL QKSYSIPAAD  180
VSRIPFAEVE QILTRPADVS TLVDGVMRDV SDAGPAATAS SSSTSSIHDS LDAQMMVDPA  240
AVAPHDMDKT NQASLRTSMT HDDLFNNPSV LSSMYYNAMR LPAPPELLFF GSDPLNSDHG  300
YESDGSGSSW VPRLWSYDEQ *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-1569136472Ethylene-responsive transcription factor ERF096
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.15e-29ERF family protein