 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
RrC9364_p1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
|
| Family |
GRAS |
| Protein Properties |
Length: 340aa MW: 39323.1 Da PI: 9.2127 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| RrC9364_p1 | genome | MSU | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 299.6 | 7.6e-92 | 1 | 337 | 44 | 373 |
GRAS 44 yfteALaarlarsvs..elykalppsetseknsseelaalklfsevsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp 140
+f++AL+arl +s+s ++ + + ++++++ ++ l+++++f sP++++ ++ N++Il+a++ ++ +H+iDf+i +G+QWp ++q ++ ++gp
RrC9364_p1 1 FFANALQARLEGSCSgaTIQSYYDSIASKKRTAAQILKSYHVFLSSSPFMTLMYFYSNKMILDAAKDASVLHVIDFGILYGFQWPMFIQHVSKSKNGPK 99
699*********65511566666888888888******************************************************************* PP
GRAS 141 slRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsles..erdevLklvksls 235
+lRiTgv+ p++g +e++e tg+rL+++++++gvpfe+n++++k++e+++lee++++p+E+laVn +l+l++l d + e+ +rd +Lkl+++++
RrC9364_p1 100 KLRITGVELPQNGfrPTERIEDTGRRLTEYCKRFGVPFEYNAIASKNWETIRLEEFKIRPDEVLAVNTALRLKNLRDVTPGGEEdcPRDGFLKLIRDMK 198
************9******************************99*******************************99988777789************ PP
GRAS 236 PkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaa 334
P+v+ + + + n++ F +rf eal +ys+l+d++ ++l++e+ eri E e+ gre++nv+aceg +r+er et+++W+ r+ +aGFk+ p++ + +
RrC9364_p1 199 PDVFLSSTVNGSFNAPFFTTRFKEALFHYSSLLDMFGSTLSKENPERIHFEGEFYGREVMNVIACEGVDRVERPETYKQWQVRMVRAGFKQKPVEAELV 297
*************************************************************************************************** PP
GRAS 335 kqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaW 373
++ + ++k + + + ++e+s+++++gWk+r L+s S+W
RrC9364_p1 298 ESFRVKMKKWGyHKDFVLDEDSNWFLQGWKGRILFSSSCW 337
********9999999************************* PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 340 aa
Download sequence Send
to blast |
FFANALQARL EGSCSGATIQ SYYDSIASKK RTAAQILKSY HVFLSSSPFM TLMYFYSNKM 60
ILDAAKDASV LHVIDFGILY GFQWPMFIQH VSKSKNGPKK LRITGVELPQ NGFRPTERIE 120
DTGRRLTEYC KRFGVPFEYN AIASKNWETI RLEEFKIRPD EVLAVNTALR LKNLRDVTPG 180
GEEDCPRDGF LKLIRDMKPD VFLSSTVNGS FNAPFFTTRF KEALFHYSSL LDMFGSTLSK 240
ENPERIHFEG EFYGREVMNV IACEGVDRVE RPETYKQWQV RMVRAGFKQK PVEAELVESF 300
RVKMKKWGYH KDFVLDEDSN WFLQGWKGRI LFSSSCWVPS
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |
