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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
30147.m013794 |
| Common Name | LOC8266360, RCOM_1507300 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
|
| Family |
GRAS |
| Protein Properties |
Length: 526aa MW: 58433.4 Da PI: 6.0936 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 30147.m013794 | genome | JCVI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 370.7 | 1.9e-113 | 154 | 525 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvs.elykal.ppsetsekn..sseelaalklfsevsPilk 92
lv+lL++cAeav+ +d++ a+alL++l+ a g+++qR+a++f ++La rl+ ++ ++++ + p + + s+++ al+l +e++P ++
30147.m013794 154 LVQLLIACAEAVACRDKSHASALLSELRSSALVFGSSFQRVASCFFQGLADRLSLVQPlGTVSLVtPIMNIM--DiaSDKKEEALSLVYEICPHIQ 247
689**************************************************9954413444332333444..445999999999********** PP
GRAS 93 fshltaNqaIleavegeervHiiDfdis....qGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlva 183
f+h++aN+ Ilea+ege+ vH++D++++ +G QW L+q+La+R+++pp +lRiT+vg + +++g+ L ++A+ +g+++ef+v v+
30147.m013794 248 FGHFVANSSILEAFEGESFVHVVDLGMTlglpHGHQWRQLIQSLANRAGKPPcRLRITAVGL----CVGRFQTIGDELVEYAKDVGINLEFSV-VE 338
************************98873333788*************98888*********....**************************9.7* PP
GRAS 184 krledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpres 279
++le+l++++++v gE+l+Vn++lqlh +++es + +vL+++ lsPk++ +veq+++hn++ Fl rf+eal+yysa+fdsl+a lpr +
30147.m013794 339 STLENLQPDDIKVFDGEVLVVNSILQLHCVVKESRGALN---SVLQTIHALSPKILALVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAMLPRYD 431
*******************************88877777...8***************************************************** PP
GRAS 280 eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
r+k+E++++++ei+n+v+ceg +r+erhe++ +Wr+r+++aGF+++p++ +++qak l k k dgy+v ee+g+lvlgWk++p+v++S+W+
30147.m013794 432 TRRAKMEQFYFAEEIKNIVSCEGPARVERHEKVDQWRRRMSRAGFQAAPVK--MMAQAKQWLGKNKvCDGYTVVEEKGCLVLGWKSKPIVAASCWK 525
*************************************************96..789**********9****************************8 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 526 aa
Download sequence Send
to blast |
MRRRLFPNDL SHDETINETS SLDISLSAMA YYPYPYLPIL ENNESIFVLD FSDETREHKK 60
RIKRALSFAE STGSDGIYNT GGSGSGSGSN DTISRSCSTN SLNSLPRLHF RDHIWTYTQR 120
YLAAEAVEEG AEAMANSEEG ENHGEGGNTD GMRLVQLLIA CAEAVACRDK SHASALLSEL 180
RSSALVFGSS FQRVASCFFQ GLADRLSLVQ PLGTVSLVTP IMNIMDIASD KKEEALSLVY 240
EICPHIQFGH FVANSSILEA FEGESFVHVV DLGMTLGLPH GHQWRQLIQS LANRAGKPPC 300
RLRITAVGLC VGRFQTIGDE LVEYAKDVGI NLEFSVVEST LENLQPDDIK VFDGEVLVVN 360
SILQLHCVVK ESRGALNSVL QTIHALSPKI LALVEQDSSH NGPFFLGRFM EALHYYSAIF 420
DSLDAMLPRY DTRRAKMEQF YFAEEIKNIV SCEGPARVER HEKVDQWRRR MSRAGFQAAP 480
VKMMAQAKQW LGKNKVCDGY TVVEEKGCLV LGWKSKPIVA ASCWKC
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | KM405290 | 0.0 | KM405290.1 Jatropha curcas GRAS32 protein (GRAS32) mRNA, complete cds. |
