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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
29889.m003281 |
| Common Name | RCOM_1000290 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
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| Family |
GRAS |
| Protein Properties |
Length: 454aa MW: 51417.8 Da PI: 8.1311 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 29889.m003281 | genome | JCVI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 244.1 | 5.9e-75 | 67 | 436 | 4 | 373 |
GRAS 4 lLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn..sseelaalkl..fsevs...Pilk 92
lLl+ A+ v ++++ a++lL+ l+s++g+++qR+++yft+AL+ r+++++++++++ + s++++ e+++ + ++ P+l+
29889.m003281 67 LLLASAHRVGNRQFDHASKLLNLCDFLSSNKGNSVQRVVHYFTKALQDRISQESETVSSKRSESKERKLLypA--EITVGVNpaLIWCClqlPCLQ 160
79999***********************************************888888776666666444442..33322113344444444**** PP
GRAS 93 fshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrle 187
+ +++ qa+ +++++++rvH iDf+i+ G++ L+qaLa+R+e p l+i gvg + s++++e g+ La fA++l++pf+f+++++ +++
29889.m003281 161 LVQFAGIQAVIDSLDSAKRVHFIDFGIKTGGHCTVLMQALANRQECPIeLLKISGVGV--KASRQRIEDAGKSLACFANTLDLPFSFKTIIVASIK 254
********************************************7665499*******..55********************************** PP
GRAS 188 dleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
dl+ ++++v+ gE++aV l l + +++ +l+ +L ++++l+P v+v++e ++h+s+ F + fle l +ys++fd +e + + + +ri
29889.m003281 255 DLKKDMFEVSDGEVVAVYLPSILRFIKAQQDCLQC----LLTVLRKLNPCVMVIIEPVLNHSSPIFIDSFLEVLLFYSTCFDGVEGCIDQCDPNRI 346
********************988888877777777....********************************************************* PP
GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaW 373
+vE+ +g+ei++++a++ +er+ +h ++ +Wr+ + ++G+ + ++s + qa+l+l++++ ++ + + ++l+ gWk+ pL+s+SaW
29889.m003281 347 SVEAS-MGQEIRDIIAAKDEERIFEHMKMDEWRDYFIRFGMVETQVSMSSFYQAELMLKNFAsGKSCLLVRNGKCLMTGWKETPLLSLSAW 436
*****.********************************************************88889999999****************** PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 454 aa
Download sequence Send
to blast |
MRQALTTWIM ASVRRISTQE IMRISRAWFR RISSEKLIDL STIQRLFDGS QFGLSGEEIK 60
DVELSLLLLA SAHRVGNRQF DHASKLLNLC DFLSSNKGNS VQRVVHYFTK ALQDRISQES 120
ETVSSKRSES KERKLLYPAE ITVGVNPALI WCCLQLPCLQ LVQFAGIQAV IDSLDSAKRV 180
HFIDFGIKTG GHCTVLMQAL ANRQECPIEL LKISGVGVKA SRQRIEDAGK SLACFANTLD 240
LPFSFKTIIV ASIKDLKKDM FEVSDGEVVA VYLPSILRFI KAQQDCLQCL LTVLRKLNPC 300
VMVIIEPVLN HSSPIFIDSF LEVLLFYSTC FDGVEGCIDQ CDPNRISVEA SMGQEIRDII 360
AAKDEERIFE HMKMDEWRDY FIRFGMVETQ VSMSSFYQAE LMLKNFASGK SCLLVRNGKC 420
LMTGWKETPL LSLSAWNFQQ EHSKKNCTKK SKVY
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