 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
29634.m002146 |
| Common Name | RCOM_0536580 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
|
| Family |
GATA |
| Protein Properties |
Length: 332aa MW: 36645.4 Da PI: 5.8692 |
| Description |
GATA family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 29634.m002146 | genome | JCVI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GATA | 63 | 3.5e-20 | 217 | 251 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
C+nC tt+TplWR+gp+g+k+LCnaCG++++k+++
29634.m002146 217 CANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEER 251
********************************986 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009793 | Biological Process | embryo development ending in seed dormancy |
| GO:0009909 | Biological Process | regulation of flower development |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0008270 | Molecular Function | zinc ion binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 332 aa
Download sequence Send
to blast |
MKEERGAWGM IDDGKEQGGG DYSIFLGRVA VAVAVAVAET EAEAEIRIRT EDLGIREEEG 60
GGERCPVLVI GEGQIHGRLF PLVTCSSNTV GQCTCGLFHT QTNSFTMLFS MPNNHPHNSY 120
DETDMYPFPS SSSSSSSSVD CTLSLGTPST RLCEDDDKRS ICHDRRPTSC MSNFCWDILQ 180
NKNTPYSPQN HKTTARGSNT TTNSNSANND PLLARRCANC DTTSTPLWRN GPRGPKSLCN 240
ACGIRFKKEE RRATAANNAS SNAGSTSSGT MEQHYAYQNN SWVQTQKMQC FSPANEFRFI 300
EDSDRDSDTG IPFLSWRLNV TDRPSLVHDF TR
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcriptional factor that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters (including its own promoter and GATA21 promoter), thus regulating the expression of genes mostly involved in hormone responses and floral organ specification (including genes regulating hormones responses) (PubMed:23335616, PubMed:26390296). Regulates both flower and shoot apical meristem (SAM) development, especially for establishing organ boundaries in shoots and flowers, probably by controlling the number and position of WUS-expressing cells (PubMed:15367721, PubMed:23335616). Coregulates, with AGO10/PNH, the shoot apical meristem (SAM) organization. Regulates floral organ development via the promotion of JAG and NPR5/BOP2 expression. Modulates cytokinin homeostasis in organ boundaries by regulating CKX3 expression (PubMed:26390296). Involved in cell proliferation and differentiation (PubMed:15367721). Required to position the inductive proembryo boundary via the regulation of gene expression and for early embryonic development (PubMed:20643354). Together with GIF1/AN3, mediates cotyledon identity by preventing ectopic root formation through the repression of PLT1 expression (PubMed:22669825). {ECO:0000269|PubMed:15367721, ECO:0000269|PubMed:20643354, ECO:0000269|PubMed:22669825, ECO:0000269|PubMed:23335616, ECO:0000269|PubMed:26390296}. |
| Regulation -- Description ? help
Back to Top |
| Source |
Description |
| UniProt | INDUCTION: Repressed via a negative regulatory feedback loop. {ECO:0000269|PubMed:23335616}. |
