PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.010G158400.2
Common NamePHAVU_010G158400g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family bHLH
Protein Properties Length: 295aa    MW: 32788.6 Da    PI: 5.0002
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.010G158400.2genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH17.85.9e-06130165538
                         HHHHHHHHHHHHHHHHHHHHCTSCCC.....TTS-S CS
                 HLH   5 hnerErrRRdriNsafeeLrellPkas..kapskKl 38 
                         h ++ErrRR+++ ++f  L   +P +s  k++ + l
  Phvul.010G158400.2 130 HIMAERRRRQELTERFIALSATIPGLSklKEKVQEL 165
                         999*********************986453333333 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474594.8E-7116160IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.5E-6130165IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    Send to blast
MEEDSCNNNS HLHMEMDFFD NNDFDDFFSD IIFHQTPPPT PFSSGSESDH SFRASSFLPS  60
AAVNAAASKR SSPRTYILSF DNSTVVPATP EPSLPSSPLP AKRALHSQNP TTRPNQGSKR  120
SRTSSQTIDH IMAERRRRQE LTERFIALSA TIPGLSKLKE KVQELEKESR KSAEETVILV  180
NKSNPNGNEE ITNSSTETNC SILPEMEARV LGKEVLIEIH CEKEYGVELK ILDHLENLHL  240
CVTGSSVLPF GNSALCITIT AQMDEERQMT VNEVVRNLRE VLSVSHLVSD SDPY*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.010G158400.2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150428e-99AP015042.1 Vigna angularis var. angularis DNA, chromosome 9, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007135788.10.0hypothetical protein PHAVU_010G158400g
TrEMBLV7AQ440.0V7AQ44_PHAVU; Uncharacterized protein
STRINGXP_007135787.10.0(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22760.15e-28bHLH family protein