PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.009G065500.2
Common NamePHAVU_009G065500g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family bZIP
Protein Properties Length: 416aa    MW: 45027.7 Da    PI: 10.2585
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.009G065500.2genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_145.91.2e-14337386554
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 
                         +r+rr++kNRe+A rsR+RK+a++ eLe +v++L++eN++L+k+  e+ +
  Phvul.009G065500.2 337 RRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKEENQELQKKQAEIME 386
                         69***************************************998777665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.7E-14333398IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.312335386IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.63E-11337386No hitNo description
CDDcd147072.97E-27337391No hitNo description
PfamPF001701.1E-12337387IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1709.3E-15337386No hitNo description
PROSITE patternPS000360340355IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009414Biological Processresponse to water deprivation
GO:0009651Biological Processresponse to salt stress
GO:0009738Biological Processabscisic acid-activated signaling pathway
GO:0010255Biological Processglucose mediated signaling pathway
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0000976Molecular Functiontranscription regulatory region sequence-specific DNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 416 aa     Download sequence    Send to blast
MNFKSFGNEA GGDGGGRPPG NFSLTRQSSV YSLTFDEFMN TMGGSGKDFG SMNMDELLKN  60
IWTAEEVQTM ASAGVAADDG GAGISHLQRQ GSLTLPRTLS QKTVDEVWKD ISKDYGGHGE  120
PNLAQTPRQP TLREMTLEEF LVRAGVVRED AKPNDGVFMD LARAGNNNGL GFEFQQMNKV  180
AAATGLMGNR LNNDPLVGLQ SSANLPLNVN GVRSSSQQPQ MQSPQSQQQH HQQQIFPKQS  240
AMSYAVAQMP QGMVRGGIVG LGGDQGLSVQ GGGIGMVGLA PGSVHVATGS PAANQLSGDK  300
MAKSNGDTSS VSPVPYVFNG GMRGRKSGGA VEKVIERRQR RMIKNRESAA RSRARKQAYT  360
MELEAEVAKL KEENQELQKK QAEIMEIQKN QVKEMMNLQR EVKRRRLRRT QTGPW*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1402406KRRRL
Functional Description ? help Back to Top
Source Description
UniProtInvolved in ABA and stress responses and acts as a positive component of glucose signal transduction. Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter. {ECO:0000269|PubMed:11005831, ECO:0000269|PubMed:15361142, ECO:0000269|PubMed:16284313, ECO:0000269|PubMed:16463099}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00186DAPTransfer from AT1G45249Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.009G065500.2
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Up-regulated by drought, salt, abscisic acid (ABA), cold and glucose. {ECO:0000269|PubMed:10636868, ECO:0000269|PubMed:11005831, ECO:0000269|PubMed:15361142, ECO:0000269|PubMed:16284313, ECO:0000269|PubMed:16463099}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAF3697920.0AF369792.1 Phaseolus vulgaris bZIP transcription factor 6 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007136688.10.0hypothetical protein PHAVU_009G065500g
RefseqXP_007136689.10.0hypothetical protein PHAVU_009G065500g
SwissprotQ9M7Q41e-120AI5L5_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 5
TrEMBLV7ASR40.0V7ASR4_PHAVU; Uncharacterized protein
STRINGXP_007136688.10.0(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G45249.13e-90abscisic acid responsive elements-binding factor 2
Publications ? help Back to Top
  1. Gao S, et al.
    ABF2, ABF3, and ABF4 Promote ABA-Mediated Chlorophyll Degradation and Leaf Senescence by Transcriptional Activation of Chlorophyll Catabolic Genes and Senescence-Associated Genes in Arabidopsis.
    Mol Plant, 2016. 9(9): p. 1272-1285
    [PMID:27373216]
  2. Seok HY, et al.
    Arabidopsis AtNAP functions as a negative regulator via repression of AREB1 in salt stress response.
    Planta, 2017. 245(2): p. 329-341
    [PMID:27770200]