PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.008G284100.2
Common NamePHAVU_008G284100g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family SAP
Protein Properties Length: 390aa    MW: 43901.9 Da    PI: 7.0109
Description SAP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.008G284100.2genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SAP536.79e-164838476454
                 SAP  76 vfqvcstwravsrsdllwqrltrriWrrtkllrdtWreeyiyrhrtarnfrtrrysyvtlqfdpadvdedndadalsCrclalsdkylaaG 166
                          +qvcstwr+vsrsdllw++ltrriWrrt ++rdtW+ eyi  hrtarnf+ +r s   +qf  +     ++  +l+Crcl lsd+ la+G
  Phvul.008G284100.2   8 CMQVCSTWREVSRSDLLWEHLTRRIWRRTFRVRDTWHREYINCHRTARNFEDGRLSSSIPQFGHS-----EHRRSLICRCLVLSDTRLACG 93 
                         689***********************************************************996.....45689**************** PP

                 SAP 167 fadGavrlfdletrlhvstflpqhrdrlGrfsravsGivisdsrlvfatldGdihvavidgagaaaarrallGdvvndGalvdfaGsgrWw 257
                         f+dG+vr+fdlet++hvstfl++h++++G+fsr++sGivi+ds+++fa+ldGdi+v++i+++g+++arra+ G v+n+G lv faG+ rWw
  Phvul.008G284100.2  94 FVDGTVRVFDLETNAHVSTFLSDHGHLFGPFSRSISGIVITDSNITFARLDGDIYVDAINVHGQSQARRAVSGFVMNNGPLVGFAGTRRWW 184
                         ******************************************************************************************* PP

                 SAP 258 vGlyaGvpGrafhiWdaeteelvfvGGsltdPeavmGWhmlteltelvGrvrvteretavaCtslrlvvfdlrnqgvvlreeeerrGlivs 348
                         vGl+aG++Gr+f++W+ae+ e vfvGGsltdPe+vmGWhmltel++ v rvrvte e++vaCt lrlv+f+  n++v+lr+  +++G++v 
  Phvul.008G284100.2 185 VGLFAGIAGRSFQVWNAESGESVFVGGSLTDPETVMGWHMLTELVDPVARVRVTEGEFVVACTGLRLVCFNAWNPEVLLRDAVSASGFVVN 275
                         ******************************************************************************************* PP

                 SAP 349 sldasneayvvvdsrGvatvrrvenleevcrfrvrg.aqrgvlgCvnggyalvyagg...vlrvWeiekkeg.ylyslrervgevnalvad 434
                         s+d+s+ea+vvv++ Gv+tv rv ++e ++rfr+rg + rg++gC+n+gy+l+y++     lrvW+ie++eg +++ +  r+gev ++va+
  Phvul.008G284100.2 276 SMDVSEEAFVVVERGGVGTVWRVGTMELMSRFRLRGsWVRGLWGCMNLGYVLTYSPNpapFLRVWNIEQEEGrLCVRVFLRAGEVSSMVAH 366
                         *******************************************************998899********9999****************** PP

                 SAP 435 drhvavsssdgtihlldfga 454
                         + h+a ss  ++i+lldfg+
  Phvul.008G284100.2 367 HSHMAFSS--NNINLLDFGV 384
                         ***98776..57*******8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF813834.25E-9652IPR001810F-box domain
Gene3DG3DSA:1.20.1280.506.2E-8771No hitNo description
SuperFamilySSF509783.97E-1166150IPR017986WD40-repeat-containing domain
Gene3DG3DSA:2.130.10.106.8E-572133IPR015943WD40/YVTN repeat-like-containing domain
SuperFamilySSF509783.97E-11215374IPR017986WD40-repeat-containing domain
Gene3DG3DSA:2.130.10.102.0E-6268366IPR015943WD40/YVTN repeat-like-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009554Biological Processmegasporogenesis
GO:0009908Biological Processflower development
GO:0030163Biological Processprotein catabolic process
GO:0046622Biological Processpositive regulation of organ growth
GO:0005634Cellular Componentnucleus
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 390 aa     Download sequence    Send to blast
MMIENFSCMQ VCSTWREVSR SDLLWEHLTR RIWRRTFRVR DTWHREYINC HRTARNFEDG  60
RLSSSIPQFG HSEHRRSLIC RCLVLSDTRL ACGFVDGTVR VFDLETNAHV STFLSDHGHL  120
FGPFSRSISG IVITDSNITF ARLDGDIYVD AINVHGQSQA RRAVSGFVMN NGPLVGFAGT  180
RRWWVGLFAG IAGRSFQVWN AESGESVFVG GSLTDPETVM GWHMLTELVD PVARVRVTEG  240
EFVVACTGLR LVCFNAWNPE VLLRDAVSAS GFVVNSMDVS EEAFVVVERG GVGTVWRVGT  300
MELMSRFRLR GSWVRGLWGC MNLGYVLTYS PNPAPFLRVW NIEQEEGRLC VRVFLRAGEV  360
SSMVAHHSHM AFSSNNINLL DFGVHDEEP*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.008G284100.2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150360.0AP015036.1 Vigna angularis var. angularis DNA, chromosome 3, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007142481.10.0hypothetical protein PHAVU_008G284100g
TrEMBLV7BA570.0V7BA57_PHAVU; Uncharacterized protein
STRINGXP_007142480.10.0(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G35770.17e-85SAP family protein