PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.008G131500.1
Common NamePHAVU_008G131500g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family ERF
Protein Properties Length: 231aa    MW: 25992.4 Da    PI: 9.2199
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.008G131500.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP235.91.9e-11109151251
                 AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                           +GV++  k+ +W A I++      +k+++lg+ g++eeAa ++++a+ 
  Phvul.008G131500.1 109 SMRGVYF--KNMKWQAAIKVD-----KKQIHLGTVGSEEEAAHLYDRAAF 151
                         579**99..47*********4.....5********************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.6E-5109152IPR001471AP2/ERF domain
SMARTSM003804.5E-4109166IPR001471AP2/ERF domain
SuperFamilySSF541717.19E-8110154IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.102.5E-6111160IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    Send to blast
MVSLRRRRLL GLCSGNSSFV TPLPLYCENL SSLENSTQQA KPKSEQPVLS DDASNLDSNT  60
AVLEEPGSSN VSGSSSSKEQ LIQPITAGPP IKRRKRHRRK NLHNQEPCSM RGVYFKNMKW  120
QAAIKVDKKQ IHLGTVGSEE EAAHLYDRAA FMCGREPNFE LPEEEKRELS KFKWDEFLAM  180
TRQAITRKKH KRRLSPGPGN SHDMLPLPKD DWDTKQGVVS EDAEQETSMS *
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1186193RKKHKRRL
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.008G131500.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007140664.11e-172hypothetical protein PHAVU_008G131500g
TrEMBLV7B7391e-171V7B739_PHAVU; Uncharacterized protein
STRINGXP_007140664.11e-172(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF54573253
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.24e-46ERF family protein