PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.007G280700.1
Common NamePHAVU_007G280700g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family bHLH
Protein Properties Length: 228aa    MW: 26105.7 Da    PI: 9.0347
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.007G280700.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH16.21.9e-0598165532
                         HHHHHHHHHHHHHHHHHHHHCTSCCC.......................................... CS
                 HLH   5 hnerErrRRdriNsafeeLrellPkas........................................k 32 
                         h + Er RR+r +++   L ++lP+ +                                         
  Phvul.007G280700.1  98 HMISERMRRQRQRQCCLALHSILPHGTktdnnsviqaaakgivrlqgcreelqrknceaeanvegvfV 165
                         7789*********************6335555555555555555555555555555555555555555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474595.23E-1090156IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088810.10593142IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.1E-697161IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009414Biological Processresponse to water deprivation
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    Send to blast
MDSFFPEKLL GEIFWDQPLL RTDQSDVVQY SHIIKAEAFP PATQSAFVPY TDLPRRNNPL  60
NGSNSESTSK RMLAFLRKSF PLERKNVEEN ERDRSFRHMI SERMRRQRQR QCCLALHSIL  120
PHGTKTDNNS VIQAAAKGIV RLQGCREELQ RKNCEAEANV EGVFVRKHDR GSKIAHLRIA  180
HPKCGIDSMV ERLKWLKEEG VDSRSIKSSF SPKELFAVLE IESGEEV*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.007G280700.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150411e-143AP015041.1 Vigna angularis var. angularis DNA, chromosome 8, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007145939.11e-169hypothetical protein PHAVU_007G280700g
TrEMBLV7BLM71e-168V7BLM7_PHAVU; Uncharacterized protein
STRINGXP_007145939.11e-169(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF125722734
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43650.11e-27bHLH family protein