PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.007G187500.1
Common NamePHAVU_007G187500g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family bHLH
Protein Properties Length: 358aa    MW: 38728.5 Da    PI: 6.8012
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.007G187500.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.82.3e-09206250554
                         HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
                 HLH   5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                         h+++Er RR+ri +++  L+el+P+ +      K + a++L + v+Y+k L
  Phvul.007G187500.1 206 HSIAERLRRERIAERMKALQELVPSiN------KTDRAAMLDEIVDYVKFL 250
                         99***********************77......****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000835.12E-11199255No hitNo description
SuperFamilySSF474594.32E-15199260IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088816.126201250IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.6E-14203261IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000107.7E-7206250IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003535.9E-11207256IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    Send to blast
MAGNSSSEGL GDDFFEQILA VPEAPVGYGR TVATDVGMLQ LGSSNSTAAA LRGGGMMPLG  60
MNLEQSAFLS HHDSRNLVDD VVNVDPSVHN NHHHHHHHHH HQHLTLHNNN SSPSSTAPIT  120
DRDSMHVRGL FSAFGQLHSP TLVPSVRPTL SSPPPPQPQL HLHHHHNQQA FQGQGGGGPA  180
LMSCTPQAPI IRPRVRARRG QATDPHSIAE RLRRERIAER MKALQELVPS INKTDRAAML  240
DEIVDYVKFL RLQVKVLSMS RLGGAGAVAQ LVADVPLSAV EQGEDIEGGA NEQAWDKWSN  300
DGTEQQVAKL MEEDVGAAMQ FLQSKALCIM PISLASAIFR MPQSESSTVI KPESNSH*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1210215RLRRER
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.007G187500.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007144828.10.0hypothetical protein PHAVU_007G187500g
TrEMBLV7BG710.0V7BG71_PHAVU; Uncharacterized protein
STRINGXP_007144828.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF112053239
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G02590.39e-59bHLH family protein