PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.005G097800.1
Common NamePHAVU_005G097800g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family bZIP
Protein Properties Length: 330aa    MW: 37613.7 Da    PI: 6.4432
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.005G097800.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.15.2e-10200243548
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                         kr +r   NR +A+rsR RK+++i eLe+ + +L+ae + L  +
  Phvul.005G097800.1 200 KRVKRILANRQSAQRSRVRKLQYISELERSATSLQAEVSVLSPR 243
                         899*********************************98777655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.0E-13196260IPR004827Basic-leucine zipper domain
PfamPF077168.9E-9197245IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.393198250IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1705.1E-11200251No hitNo description
SuperFamilySSF579591.48E-10200254No hitNo description
CDDcd147034.94E-21201251No hitNo description
PROSITE patternPS000360203218IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    Send to blast
MAQLPPKIPN VSPSWPDFSS QHQKMPLPPL NNGTTNNNTG HYQHHQNPSW VDEFLDFSSA  60
RRGAHRRSVS DSITYLDAPI RCGENSNNNN NNSNENEFDK FDDEQFMSMF TDEVVLSGVP  120
LPPPTTLSSS NPSSPSDQNF FHDEKERSRK EMKLQKEDEE HRHQLKNEAD EVESQCIQEI  180
MQPPNDTNTS SSNERITDPK RVKRILANRQ SAQRSRVRKL QYISELERSA TSLQAEVSVL  240
SPRVAFLDHQ RLLLNVDNSA LKQRIAALAQ DKIFKDAHQD ALKREIERLR QVYHQQSLKK  300
MENAAGSPLP LPNSICEVQT EKEVQLLNV*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator. {ECO:0000269|PubMed:17719007}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.005G097800.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0969000.0BT096900.1 Soybean clone JCVI-FLGm-25J24 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007149772.10.0hypothetical protein PHAVU_005G097800g
SwissprotQ9M2K41e-110BZP61_ARATH; Basic leucine zipper 61
TrEMBLV7BYT30.0V7BYT3_PHAVU; Uncharacterized protein
STRINGXP_007149772.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20113488
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58120.11e-105bZIP family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Gibalová A, et al.
    Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte.
    Plant Reprod, 2017. 30(1): p. 1-17
    [PMID:27896439]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]