PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.001G140100.1
Common NamePHAVU_001G140100g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family bZIP
Protein Properties Length: 484aa    MW: 54325.4 Da    PI: 8.6941
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.001G140100.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.78.2e-11192222535
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekv 35 
                         k  rr+++NReAAr+sR+RKka++++Le   
  Phvul.001G140100.1 192 KTLRRLAQNREAARKSRLRKKAYVQQLESSR 222
                         7789***********************9754 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1706.6E-8185234No hitNo description
SMARTSM003385.1E-8188261IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.14190234IPR004827Basic-leucine zipper domain
PfamPF001705.0E-8192230IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.94E-7192234No hitNo description
PROSITE patternPS000360195210IPR004827Basic-leucine zipper domain
PfamPF141444.2E-32284357IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 484 aa     Download sequence    Send to blast
MASKTTNPAT NNQFEPLPPP QHRHPHPHHY QFQQHQHHQI HDHQISFRMM QSSSSSSSIP  60
GNYLRGKDSG AYDLGELDQA FFLYLDGQAD PSTVQDQRQN SSSGMRPPTL NIFPSKPMHV  120
EPSSSKSKAN IELVSPQTSG SKRPSEPSME LANPRNEGAS APQPPKAVKR ESNRKGPTSS  180
SEQEGPKTPD PKTLRRLAQN REAARKSRLR KKAYVQQLES SRVRLNQLEQ DLQRARTQGM  240
FLGGGALLGG EQSLPVAMNT ISSEAAMFDV EYARWVEEHH RIVCELRAAV QEHLPENELR  300
LFVDNCLAHY DQVMNLKSLV AKTDVFHLVS GMWKTPAERC FMWIGGFRPS ELIKIILSQI  360
EPLTEQQILG ICGLQQSTHE AEEALSQGLE ALNQSLSDTI ASDSLSYPPN MANYMGQMAV  420
AMNKLSTLEG FVRQADNLRH QTIHRLHQLL TTRQAARCFL AIAEYFHRLR ALSSLWLARP  480
RVE*
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00491DAPTransfer from AT5G06839Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.001G140100.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150371e-124AP015037.1 Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007162295.10.0hypothetical protein PHAVU_001G140100g
SwissprotQ52MZ20.0TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBLV7CW020.0V7CW02_PHAVU; Uncharacterized protein
STRINGXP_007162295.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF47313455
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.30.0bZIP family protein