PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.001G119300.1
Common NamePHAVU_001G1193000g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family bZIP
Protein Properties Length: 784aa    MW: 85057.1 Da    PI: 5.2043
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.001G119300.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_142.21.7e-13274334363
                         XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                         + kr  r+++NRe+A+ sRqRKk ++eeLeekv ++ +   +L ++++ +  e a+l+++v
  Phvul.001G119300.1 274 DEKRKARLMRNRESAQLSRQRKKHYVEELEEKVRSMNSIIADLSSKISYMVAENATLRQQV 334
                         5699*******************************************99999999999876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.8E-14272336IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.369274334IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.0E-11276334No hitNo description
PfamPF001708.0E-12276334IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1704.6E-16276334No hitNo description
CDDcd147041.16E-20277328No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0016021Cellular Componentintegral component of membrane
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 784 aa     Download sequence    Send to blast
MTESMHAVEP SSEAAELLAS DPLFDEFSAE FGSLPFLSMD SLFNSDTLPF ASDLEFGMDF  60
DDNNGEFEIT FDDLDDICIP SDAEDFLLTD ACNPDNTSVL GPIEESSAKN SDSPRSDASV  120
VSGDRSSGVS RFFNSQASDS VSEGNSCKEG SLDAVDVRVS NIPSPESEFC DREESSSGPV  180
SSQGSGNAGS GVYEAINSPS PDSVSFERDI TSSHAHEVMD KGVKLEEISG CDLKRKKESC  240
EGSATKHRRF SSSSVDTKTE KQTPSDVNAI DDDDEKRKAR LMRNRESAQL SRQRKKHYVE  300
ELEEKVRSMN SIIADLSSKI SYMVAENATL RQQVGAGVMC APPPPAPGIY PHPPMAPMPY  360
PWMPCAPYVV KPQGSQVPLV PIPRLKPQQH TSAPKGKKSE SKKSEGKTKK VASISFLGLF  420
FFIMLFGGLV PLVDFKFGGL VDNVPDTGLS SYVSDRVHGH GGGKVWSVNG PRNGSERDEE  480
VGFSNERFSV KDKMNYERGR HLGEERGERQ GPDDFGRQGN ASEPLVASLY VPRNDKMVKI  540
DGNLIIHSIM ASEKAMASQT AEAKEKKETG LAIPKDSDSA LAIPEVGRLR GQHPHVYRVP  600
AEQRKALGSG STKALKDHMK SSATDGKMQQ WFREGLAGPM LSSGMCTEVF QFDVSPSPGA  660
IVPATSVANL STEKRQNATS VKKTRNRRTL HGLPDSLTGS SLNITEEHVK NLQKDHLHGN  720
ESSMVVSVLV DPKEAGDGDV DVDGMMRPKS LSRIFVVVLI DSVKYVTYSC GLPRASPHLI  780
FDI*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1674687RQNATSVKKTRNRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.001G119300.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150370.0AP015037.1 Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007162048.10.0hypothetical protein PHAVU_001G1193000g, partial
TrEMBLV7CV370.0V7CV37_PHAVU; Uncharacterized protein (Fragment)
STRINGXP_007162048.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF74873448
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40950.11e-149bZIP family protein