PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pavir.3KG441200.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family | EIL | ||||||||
Protein Properties | Length: 600aa MW: 67048.2 Da PI: 5.7169 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 429 | 4.6e-131 | 38 | 417 | 1 | 352 |
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasds 90 e+l +rmwkd+++l+r+ker+++l ++a++++++ + +++qa rkkmsraQDgiLkYMlk mevcna+GfvYgiip+kgkpv+gasd+ Pavir.3KG441200.2.p 38 EDLARRMWKDRVRLRRIKERQQKLA-LQQAELEKSRPKPISDQAMRKKMSRAQDGILKYMLKLMEVCNARGFVYGIIPDKGKPVSGASDN 126 89*******************9865.66667*********************************************************** PP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HH CS EIN3 91 LraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelw 180 +raWWkekv+fd+ngpaai ky+++nl+++++++ + +++hsl++lqD+tlgSLLs+lmqhc+ppqr++plekg++pPWWP+G+e+w Pavir.3KG441200.2.p 127 IRAWWKEKVKFDKNGPAAIEKYESENLVSANAQNG---GIKNQHSLMDLQDATLGSLLSSLMQHCNPPQRKYPLEKGTPPPWWPSGNEEW 213 ******************************99999...88************************************************** PP HHHHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX.XX.... CS EIN3 181 wgelglskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah.ss.... 265 w +lgl+ q ppykkphdlkk+wkv+vLt vi+hmsp++++i++++r+sk+lqdkm+akes ++l vl++ee++++++ s+ Pavir.3KG441200.2.p 214 WISLGLPSGQM-PPYKKPHDLKKVWKVGVLTGVIRHMSPNFDKIKNQVRKSKCLQDKMTAKESLIWLGVLQREERLVHRIDNGvSEithh 302 *******9999.9*******************************************************************9996446677 PP XXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXX...........................XXXXXXXXXXXXXXXXXX.XXX.... CS EIN3 266 slrkqspkvtlsceqkedvegkkeskikhvqavktta...........................gfpvvrkrkkkpsesakv.sskevsr 327 sl ++ + t+s+++++dv+g ++ ++++++++++ +p +rk++p+++++ ss+++ Pavir.3KG441200.2.p 303 SLLEDTNGETISSSNEYDVDGFEDAPLSTSSKDDEQDlspvaqsaeehvpkrgrerasnkrpsqIVPSKARRKEPPKRKRARhSSTGIEP 392 88889999************8888887999999998899999999999999999999999999866666666666665554404556666 PP ..XXXXXXX.XXXXXXXXXXXXXXX CS EIN3 328 tcqssqfrgsetelifadknsisqn 352 qs +++++ ++d+n+++q Pavir.3KG441200.2.p 393 DIQSVDDAPENPRNLIPDMNQLDQV 417 7788888888899999999998886 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 4.1E-126 | 38 | 286 | No hit | No description |
Gene3D | G3DSA:1.10.3180.10 | 3.4E-69 | 160 | 293 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
SuperFamily | SSF116768 | 7.19E-60 | 166 | 289 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0042762 | Biological Process | regulation of sulfur metabolic process | ||||
GO:0071281 | Biological Process | cellular response to iron ion | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 600 aa Download sequence Send to blast |
MDQLAILATE LVDSSDFEVE GIPNLTENDV SDEEIEPEDL ARRMWKDRVR LRRIKERQQK 60 LALQQAELEK SRPKPISDQA MRKKMSRAQD GILKYMLKLM EVCNARGFVY GIIPDKGKPV 120 SGASDNIRAW WKEKVKFDKN GPAAIEKYES ENLVSANAQN GGIKNQHSLM DLQDATLGSL 180 LSSLMQHCNP PQRKYPLEKG TPPPWWPSGN EEWWISLGLP SGQMPPYKKP HDLKKVWKVG 240 VLTGVIRHMS PNFDKIKNQV RKSKCLQDKM TAKESLIWLG VLQREERLVH RIDNGVSEIT 300 HHSLLEDTNG ETISSSNEYD VDGFEDAPLS TSSKDDEQDL SPVAQSAEEH VPKRGRERAS 360 NKRPSQIVPS KARRKEPPKR KRARHSSTGI EPDIQSVDDA PENPRNLIPD MNQLDQVEIQ 420 GMATQIVSFN HGGTTSEALH HRGDTQVQVH LPGAEGNDFD GDPAANATPI SIYVGGQHVP 480 YQNSDSARSR SENNLPSSYH TLPPKQSLPL SMMDHHVVPM GVRAPTDNIP YGDHILGGNS 540 TSVPGDMQQL IDFPFYGEQD KFVGSSFEGL PLDYISISSP IPDIDDLLHD DDLMEYLGT* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1wij_A | 3e-65 | 166 | 291 | 9 | 134 | ETHYLENE-INSENSITIVE3-like 3 protein |
Search in ModeBase |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Pvr.26263 | 0.0 | callus| leaf| root |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor that may be involved in the ethylene response pathway. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00233 | DAP | Transfer from AT1G73730 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Pavir.3KG441200.2.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025800640.1 | 0.0 | ETHYLENE INSENSITIVE 3-like 3 protein | ||||
Refseq | XP_025800641.1 | 0.0 | ETHYLENE INSENSITIVE 3-like 3 protein | ||||
Refseq | XP_025800642.1 | 0.0 | ETHYLENE INSENSITIVE 3-like 3 protein | ||||
Swissprot | O23116 | 1e-145 | EIL3_ARATH; ETHYLENE INSENSITIVE 3-like 3 protein | ||||
TrEMBL | A0A3L6QL82 | 0.0 | A0A3L6QL82_PANMI; ETHYLENE INSENSITIVE 3-like 3 protein | ||||
STRING | Pavir.J02229.1.p | 0.0 | (Panicum virgatum) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G73730.1 | 1e-142 | ETHYLENE-INSENSITIVE3-like 3 |
Link Out ? help Back to Top | |
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Phytozome | Pavir.3KG441200.2.p |
Publications ? help Back to Top | |||
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