PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pavir.2NG257300.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family | bZIP | ||||||||
Protein Properties | Length: 363aa MW: 39726.2 Da PI: 6.6109 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 35.8 | 1.8e-11 | 131 | 160 | 5 | 34 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeek 34 k rr+++NReAAr+sR+RKka+i++Le+ Pavir.2NG257300.1.p 131 KTLRRLAQNREAARKSRLRKKAYIQQLETS 160 788************************974 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 8.9E-6 | 127 | 182 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 8.829 | 129 | 172 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.0E-8 | 129 | 171 | No hit | No description |
CDD | cd14708 | 6.82E-21 | 131 | 183 | No hit | No description |
SuperFamily | SSF57959 | 1.34E-7 | 131 | 165 | No hit | No description |
Pfam | PF00170 | 1.5E-8 | 131 | 160 | IPR004827 | Basic-leucine zipper domain |
PROSITE pattern | PS00036 | 0 | 134 | 149 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 3.3E-26 | 215 | 287 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 363 aa Download sequence Send to blast |
MMPASSTMSK ESASYDMAEF DQSAIFLYLD GHDQEQRQTL NIFPSQPMHV AEPIPAKDVS 60 VGMVAAMPNG NSSPPKRQEQ GGQRSPAVPP APTVALLTSA KETKSSLTKK EATNGGKGAT 120 SGDQERVRDP KTLRRLAQNR EAARKSRLRK KAYIQQLETS RIRLSQLEQQ VQVARVQGVF 180 LGTGEQPGFP SAPSPAVVFD MEYGRWVEEH SKLIFQLRAA LNEHLADEQL QGFVNGAMAQ 240 HEELLNLKGA LARADVFHLL SGVWASPAER CFLWLGGFCP SEVIKVMLKH VEPLSEGQIL 300 GIYNLQQTVQ EREEALNHSM EATQQSISDI IAAPDVAPAT FMGHMSLAMN KVSSMEGFVM 360 QS* |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Pvr.26592 | 1e-76 | root |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Pavir.2NG257300.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012698770.1 | 0.0 | transcription factor TGAL7 isoform X2 | ||||
Swissprot | Q6H434 | 1e-165 | TGAL7_ORYSJ; Transcription factor TGAL7 | ||||
TrEMBL | A0A3L6TBM4 | 0.0 | A0A3L6TBM4_PANMI; Transcription factor TGA2-like isoform X1 | ||||
STRING | Si029966m | 0.0 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP2732 | 36 | 69 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06839.3 | 1e-107 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Pavir.2NG257300.1.p |
Publications ? help Back to Top | |||
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