PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pavir.2KG274400.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family | bZIP | ||||||||
Protein Properties | Length: 427aa MW: 46576.1 Da PI: 8.7209 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 35.5 | 2.2e-11 | 133 | 161 | 5 | 33 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLee 33 k rr+++NReAAr+sR+RKka+i++Le+ Pavir.2KG274400.1.p 133 KTLRRLAQNREAARKSRLRKKAYIQQLET 161 788************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 8.9E-6 | 129 | 184 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 8.829 | 131 | 174 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.3E-8 | 131 | 173 | No hit | No description |
SuperFamily | SSF57959 | 1.97E-7 | 133 | 167 | No hit | No description |
CDD | cd14708 | 1.73E-20 | 133 | 185 | No hit | No description |
Pfam | PF00170 | 1.9E-8 | 133 | 162 | IPR004827 | Basic-leucine zipper domain |
PROSITE pattern | PS00036 | 0 | 136 | 151 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 4.6E-28 | 217 | 289 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 427 aa Download sequence Send to blast |
MMPASSTMSK ESTSYDMAEF DQSAIFLYLD GHDQEQRQTL NIFPSQPMHV AEPIPAKGVS 60 MGMVAAMLPN GNSSPPKRQE QGGQRSPAVP PPAPTVALPN SAKETKSSLS KKEAKSGGKG 120 ATSGDQERVR DPKTLRRLAQ NREAARKSRL RKKAYIQQLE TSRIRLSQLE QQVQVARVQG 180 VFLGTGEQPG FPSAPSPAVV FDMEYGRWVE EHSKLIFQLR AALNEHLADE QLQGFVNGAM 240 AQHEELLNLK GAMARADVFH LLSGVWASPA ERCFLWLGGF RPSEVIKVML KHVEPLSEGQ 300 ILGIYNLQQS VQEREEALNH SMEATQQSIS DTIAAPDVAP ATFMGHMSIA MNKVASMEGF 360 VMQVRRWPKA ADPPQAPPHP DHPSGCSVHG CDRRLLPPPS RAQHSLCCKA KAGGWASAVD 420 EARGIK* |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Pvr.26592 | 1e-148 | root |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Pavir.2KG274400.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025804474.1 | 0.0 | transcription factor TGAL7-like isoform X3 | ||||
Swissprot | Q6H434 | 1e-165 | TGAL7_ORYSJ; Transcription factor TGAL7 | ||||
TrEMBL | A0A3L6TBM4 | 0.0 | A0A3L6TBM4_PANMI; Transcription factor TGA2-like isoform X1 | ||||
STRING | Si029966m | 0.0 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP2732 | 36 | 69 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06839.3 | 1e-101 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Pavir.2KG274400.1.p |
Publications ? help Back to Top | |||
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