PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Potri.010G142900.1
Common NamePOPTR_0010s15280g
Organism
Populus trichocarpa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family bZIP
Protein Properties Length: 144aa    MW: 16613 Da    PI: 9.9623
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Potri.010G142900.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.29.9e-102559539
                        CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLe 39
                        kr +r+++NRe+ArrsR ++++++e L ++   Le
  Potri.010G142900.1 25 KRRKRMISNRESARRSRMKRQKYMEDLVTEKSILE 59
                        9**************************88877776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003388.7E-92185IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1704.2E-823105No hitNo description
PROSITE profilePS502178.7832361IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.56E-92579No hitNo description
PfamPF001703.4E-82560IPR004827Basic-leucine zipper domain
CDDcd147026.43E-132676No hitNo description
PROSITE patternPS0003602843IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006521Biological Processregulation of cellular amino acid metabolic process
GO:0009267Biological Processcellular response to starvation
GO:0009617Biological Processresponse to bacterium
GO:0009651Biological Processresponse to salt stress
GO:0009901Biological Processanther dehiscence
GO:0010182Biological Processsugar mediated signaling pathway
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0071333Biological Processcellular response to glucose stimulus
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 144 aa     Download sequence    Send to blast
MPPSFAKAGS SGSEIDPPNA MVDEKRRKRM ISNRESARRS RMKRQKYMED LVTEKSILER  60
KIYEDNKKYA ALWQRHFALE SDNKVLTDEK LKLAEYLKNL QQVLASYNVI ESDQDLEVSD  120
RFLNPWQVHG SVKSITASGM FKV*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13843RSRMKR
Cis-element ? help Back to Top
SourceLink
PlantRegMapPotri.010G142900.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002314935.11e-102basic leucine zipper 1
TrEMBLA0A3G1CGI71e-101A0A3G1CGI7_POPCN; BZIP transcription factor
TrEMBLB9HWY91e-101B9HWY9_POPTR; Uncharacterized protein
STRINGPOPTR_0010s15280.11e-102(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF15536812
Representative plantOGRP1379334
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49450.13e-23basic leucine-zipper 1