PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Potri.010G128000.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family | bZIP | ||||||||
Protein Properties | Length: 238aa MW: 26262.1 Da PI: 9.1485 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 32.1 | 2.5e-10 | 147 | 197 | 4 | 58 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 k rr+++NReAArr R+RKka++++Le+ L++ + el++ +++v++ Potri.010G128000.1 147 QKTLRRLAQNREAARRGRLRKKAYVQQLENSRLRLTQLEQ----ELQRARQQVQE 197 6889*************************98888877775....55566666554 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 6.0E-8 | 141 | 197 | No hit | No description |
SMART | SM00338 | 1.3E-4 | 144 | 204 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.415 | 146 | 197 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 4.0E-7 | 148 | 197 | No hit | No description |
Pfam | PF00170 | 2.2E-7 | 148 | 191 | IPR004827 | Basic-leucine zipper domain |
PROSITE pattern | PS00036 | 0 | 151 | 166 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 238 aa Download sequence Send to blast |
MYCHSSFLLR NQTRLADLGK LHQPVPVSPH DDAVDLSSSN VTVVSHNLPY ATALNTSIGS 60 AEIATTGAGC LDTGQYVYQK GTGFDSSLGN GQSFENWGDS GMADNSLQTD TSTDVNTDDK 120 NQLRGVPHGA VMVVNSMDQS KGRTSDQKTL RRLAQNREAA RRGRLRKKAY VQQLENSRLR 180 LTQLEQELQR ARQQVQEVFS LSSRIFFIAS GFCGDHGRHS MDGNGKGFWI YQNRFRS* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 160 | 166 | RRGRLRK |
Expression -- Description ? help Back to Top | ||||||
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Source | Description | |||||
Uniprot | DEVELOPMENTAL STAGE: Expressed in the apical meristem, the floral meristem, each whorl of organ primordia, and in ovule primordia during wild-type flower development. {ECO:0000269|PubMed:9990857}. |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator involved in the determination of floral organ number. Acts to determine floral organ patterning by establishing floral organ primordia in specific numbers and positions. Plays a role in regulating stem cell fate by directly controlling AG expression. Binds to the 5'-AAGAAT-3' cis-acting element found in AG promoter. Might represent a target for a post-translational modification by GRXC7/ROXY1. {ECO:0000269|PubMed:19395638, ECO:0000269|PubMed:19395639, ECO:0000269|PubMed:9990857}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Potri.010G128000.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002311449.2 | 1e-114 | transcription factor TGA2.2 isoform X1 | ||||
Refseq | XP_024462464.1 | 1e-114 | transcription factor TGA2.2 isoform X2 | ||||
Swissprot | Q9SX27 | 2e-42 | PAN_ARATH; Transcription factor PERIANTHIA | ||||
TrEMBL | A0A1L6K4R4 | 1e-114 | A0A1L6K4R4_POPTO; Erianthia family protein | ||||
STRING | POPTR_0008s11710.1 | 1e-114 | (Populus trichocarpa) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF6022 | 31 | 49 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68640.1 | 1e-34 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Potri.010G128000.1 |