PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Potri.006G277800.6
Common NamePOPTR_0006s29250g
Organism
Populus trichocarpa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family bZIP
Protein Properties Length: 301aa    MW: 32456.8 Da    PI: 5.9638
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Potri.006G277800.6genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_153.65e-17131183355
                         XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 
                         ++kr rr+ +NRe+ArrsR+RK+a +  Le  v+ +++eN +L k+l+  +++
  Potri.006G277800.6 131 DIKRIRRMVSNRESARRSRKRKQAHLSDLEVQVDHMTGENASLFKQLSDATQQ 183
                         68*****************************************9888776665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003387.5E-17129193IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.806131194IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.34E-13132184No hitNo description
PfamPF001707.0E-15132183IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.2E-13133185No hitNo description
CDDcd147025.98E-21134185No hitNo description
PROSITE patternPS000360136151IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0071333Biological Processcellular response to glucose stimulus
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042803Molecular Functionprotein homodimerization activity
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    Send to blast
MEEQKAGGSD GMKKSESELA DFSAEIYGFF SDIFSGDLSS FPVNKTRDIV NGFSTCGGLT  60
ESCFLWSQNT NPKNSSVSVS TDAQSSLCVG SPMSANKPRV KDSQTRVAAS VSSPDQSDED  120
GLSEQSTNPH DIKRIRRMVS NRESARRSRK RKQAHLSDLE VQVDHMTGEN ASLFKQLSDA  180
TQQFRTAETN RRVLNSDVEA LRAKVKLAED MVARGSLTCN NLNQFLQSHL TSPQLLNNHN  240
LHLMPNVSPT ITIQGDEAYA GMSVSGQNSG LGLGSADISN GNLNNGILSD AASCITNIWS  300
*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1145151RRSRKRK
2145152RRSRKRKQ
3147152SRKRKQ
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Pth.110880.0stem
Cis-element ? help Back to Top
SourceLink
PlantRegMapPotri.006G277800.6
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankGU2750604e-67GU275060.1 Populus balsamifera isolate GIL14 haplotype A G/HBF1-related bZIP protein gene, partial sequence.
GenBankGU2750614e-67GU275061.1 Populus balsamifera isolate GIL14 haplotype B G/HBF1-related bZIP protein gene, partial sequence.
GenBankGU2750624e-67GU275062.1 Populus balsamifera isolate HAY07 haplotype A G/HBF1-related bZIP protein gene, partial sequence.
GenBankGU2750634e-67GU275063.1 Populus balsamifera isolate HAY07 haplotype B G/HBF1-related bZIP protein gene, partial sequence.
GenBankGU2750644e-67GU275064.1 Populus balsamifera isolate INU03 haplotype A G/HBF1-related bZIP protein gene, partial sequence.
GenBankGU2750654e-67GU275065.1 Populus balsamifera isolate INU03 haplotype B G/HBF1-related bZIP protein gene, partial sequence.
GenBankGU2750664e-67GU275066.1 Populus balsamifera isolate KUU07 haplotype A G/HBF1-related bZIP protein gene, partial sequence.
GenBankGU2750674e-67GU275067.1 Populus balsamifera isolate KUU07 haplotype B G/HBF1-related bZIP protein gene, partial sequence.
GenBankGU2750684e-67GU275068.1 Populus balsamifera isolate LOV02 haplotype A G/HBF1-related bZIP protein gene, partial sequence.
GenBankGU2750694e-67GU275069.1 Populus balsamifera isolate LOV02 haplotype B G/HBF1-related bZIP protein gene, partial sequence.
GenBankGU2750704e-67GU275070.1 Populus balsamifera isolate MGR10 haplotype A G/HBF1-related bZIP protein gene, partial sequence.
GenBankGU2750714e-67GU275071.1 Populus balsamifera isolate MGR10 haplotype B G/HBF1-related bZIP protein gene, partial sequence.
GenBankGU2750724e-67GU275072.1 Populus balsamifera isolate NWL07 haplotype A G/HBF1-related bZIP protein gene, partial sequence.
GenBankGU2750734e-67GU275073.1 Populus balsamifera isolate NWL07 haplotype B G/HBF1-related bZIP protein gene, partial sequence.
GenBankGU2750744e-67GU275074.1 Populus balsamifera isolate POR11 haplotype A G/HBF1-related bZIP protein gene, partial sequence.
GenBankGU2750754e-67GU275075.1 Populus balsamifera isolate POR11 haplotype B G/HBF1-related bZIP protein gene, partial sequence.
GenBankGU2750764e-67GU275076.1 Populus balsamifera isolate RNA13 haplotype A G/HBF1-related bZIP protein gene, partial sequence.
GenBankGU2750774e-67GU275077.1 Populus balsamifera isolate RNA13 haplotype B G/HBF1-related bZIP protein gene, partial sequence.
GenBankGU2750784e-67GU275078.1 Populus balsamifera isolate WHR03 haplotype A G/HBF1-related bZIP protein gene, partial sequence.
GenBankGU2750794e-67GU275079.1 Populus balsamifera isolate WHR03 haplotype B G/HBF1-related bZIP protein gene, partial sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006382195.10.0basic leucine zipper 9
TrEMBLU5GEY10.0U5GEY1_POPTR; Uncharacterized protein
STRINGPOPTR_0006s29250.10.0(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24800.18e-73basic leucine zipper 9