PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Potri.001G374200.1 | ||||||||
Common Name | POPTR_0001s38320g | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family | bZIP | ||||||||
Protein Properties | Length: 332aa MW: 37128.9 Da PI: 6.6109 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 32.3 | 2.2e-10 | 208 | 250 | 8 | 50 |
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 8 rrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 r NR +A+rsR RK+++i eLe+ v +L++e +aL ++ Potri.001G374200.1 208 SRILANRQSAQRSRVRKLQYISELERSVTTLQTEVSALSPRVA 250 56678*****************************999987765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.7E-12 | 200 | 265 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 8.76 | 203 | 255 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14703 | 1.32E-21 | 205 | 256 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 2.2E-11 | 207 | 256 | No hit | No description |
SuperFamily | SSF57959 | 2.39E-10 | 207 | 257 | No hit | No description |
Pfam | PF00170 | 2.1E-8 | 207 | 249 | IPR004827 | Basic-leucine zipper domain |
PROSITE pattern | PS00036 | 0 | 209 | 223 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 332 aa Download sequence Send to blast |
MAQLPPKIPA VTQNWPSFSH QTMSNYFSNA AATMENHQPC WVDEFLDFTS TRRGSHRRSI 60 SDCITFIETT NMPSLVEDQC HDNNNSSSCN NNHSSSNALI SANLGFDKLD DDQLMSMFSH 120 DMSLSLPPSS SNPSTPSDQN SKNDEKPSKP TDQHHHQEEG NTEQQQAAVA KTEPGEVESS 180 CKQEPHQPPL PTSSNNGDTI NDPKRVKSRI LANRQSAQRS RVRKLQYISE LERSVTTLQT 240 EVSALSPRVA FLDHQRLILN VDNSALKQRI AALAQDKIFK DAHQEALKKE IERLRQVYHH 300 QNLKKMNSSG HAAEAAREQS PNHEAIQCSE N* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator. {ECO:0000269|PubMed:17719007}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Potri.001G374200.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AC217644 | 0.0 | AC217644.1 Populus trichocarpa clone POP037-C20, complete sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002298901.1 | 0.0 | basic leucine zipper 61 isoform X1 | ||||
Refseq | XP_024460725.1 | 0.0 | basic leucine zipper 61 isoform X1 | ||||
Refseq | XP_024460729.1 | 0.0 | basic leucine zipper 61 isoform X1 | ||||
Swissprot | Q9M2K4 | 1e-101 | BZP61_ARATH; Basic leucine zipper 61 | ||||
TrEMBL | B9GGF1 | 0.0 | B9GGF1_POPTR; Uncharacterized protein | ||||
STRING | POPTR_0001s38320.1 | 0.0 | (Populus trichocarpa) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF2011 | 34 | 88 | Representative plant | OGRP126 | 17 | 181 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G58120.1 | 2e-95 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Potri.001G374200.1 |
Entrez Gene | 7487577 |
Publications ? help Back to Top | |||
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