PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Potri.001G020200.2 | ||||||||
Common Name | POPTR_0001s05750g | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family | bZIP | ||||||||
Protein Properties | Length: 254aa MW: 28225.1 Da PI: 6.6978 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 32.4 | 2.1e-10 | 92 | 137 | 6 | 51 |
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 6 rerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 + +r + NReA r++Rq+Kka ++ Lee+vk+L N++L ++++ Potri.001G020200.2 92 KVKRPAGNREAVRKYRQKKKAHTAYLEEEVKKLRISNQQLVRKIQQ 137 6689999*********************************999986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 3.4E-13 | 84 | 153 | No hit | No description |
SMART | SM00338 | 3.9E-10 | 87 | 154 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 8.852 | 89 | 155 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF07716 | 1.3E-13 | 90 | 137 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14686 | 8.22E-11 | 92 | 145 | No hit | No description |
SuperFamily | SSF57959 | 4.88E-8 | 92 | 138 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 254 aa Download sequence Send to blast |
MKDYNMDDGE IELSDHVLLP NPDSSGSLQS SASVDSLLDE FLKNTRTCTH THTCNPLGPD 60 ITHTHTCYHT HTQVITSEED DDVNNREHSN SKVKRPAGNR EAVRKYRQKK KAHTAYLEEE 120 VKKLRISNQQ LVRKIQQQVI LEAEVLRLRS ILMGLRGKID TELGVLPFQN QGDATAAFKD 180 GNCGAQSTGG PMNLQCQTDL PCFHTQVVEG HAMDMVEALI MIKFLLVLLL KISMVISVFP 240 QTHNGIGTHT VVT* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Potri.001G020200.2 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002299223.2 | 1e-157 | basic leucine zipper 23 | ||||
Refseq | XP_024458783.1 | 1e-157 | basic leucine zipper 23 | ||||
TrEMBL | B9GM57 | 1e-156 | B9GM57_POPTR; Uncharacterized protein | ||||
STRING | POPTR_0001s05750.1 | 1e-157 | (Populus trichocarpa) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G16770.1 | 3e-34 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Potri.001G020200.2 |
Entrez Gene | 7496026 |