PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pta008683
Organism
Pinus taeda
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pinus; Pinus
Family bZIP
Protein Properties Length: 288aa    MW: 31852 Da    PI: 9.3281
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-157a-Pinus_taeda-26275PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_148.51.8e-15167226463
                XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                +++++r+ +NRe+ArrsR+RK+ ++ eL   v+ L+aeN + +++l+  ++++a+ + e+
  Pta008683 167 VRKQKRMLSNRESARRSRLRKQLRLNELNAQVAYLKAENGQIQNKLNIASQQYAQITEEN 226
                689**************************************************9998876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.1E-13164228IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1704.4E-10166220No hitNo description
PROSITE profilePS5021710.714166229IPR004827Basic-leucine zipper domain
PfamPF001704.4E-11167225IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.13E-11167223No hitNo description
CDDcd147021.03E-19169220No hitNo description
PROSITE patternPS000360171186IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    Send to blast
QKGLCNKATV AIFSFLEQAV IIRKGSERFV PVSISLTALQ SNQILVSHSN QMGIDKNSVV  60
PIQPLQFSRE VYHMGSTQYD NMNFSANLNA PGHMGSTQYD NMNFSANLNA PGAKTAVSTK  120
KSVPMSEDKS CPIQDSLHHR RGNGEGISHS WSISACAAAE DQQVIDVRKQ KRMLSNRESA  180
RRSRLRKQLR LNELNAQVAY LKAENGQIQN KLNIASQQYA QITEENYLLK IEAVKLSHEF  240
QGLHYIIAAQ SGSAYKTMSI ETGNCSAAHL SSESVIIPNS FTSPDFLF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1180186RRSRLRK
2180187RRSRLRKQ
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLH9WFT31e-101H9WFT3_PINTA; Uncharacterized protein (Fragment)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75390.19e-21basic leucine-zipper 44