PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Psi008023 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family | Trihelix | ||||||||
Protein Properties | Length: 239aa MW: 26823.5 Da PI: 5.3422 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 55.6 | 1.4e-17 | 120 | 184 | 2 | 66 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkike 66 W +e++ L+++r+em+ ++r+++l++ We+vs+k++e g++rs++ Ckek+e++n k k+ Psi008023 120 WATEETQNLLRIRSEMHLKFRDSNLQAVAWEDVSRKLAELGYRRSAQACKEKIEQVNLTSDKAKD 184 ******************************************************99866655555 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50090 | 6.249 | 112 | 176 | IPR017877 | Myb-like domain |
Pfam | PF13837 | 2.1E-13 | 119 | 185 | No hit | No description |
CDD | cd12203 | 2.31E-18 | 120 | 176 | No hit | No description |
Sequence ? help Back to Top |
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Protein Sequence Length: 239 aa Download sequence Send to blast |
MQSGGQYGIH DIQQLMMERG PPPRMFALSP DMLSHPMKPP GLHPHSIPHH FIPFPLDHHY 60 QHSLVTHHAQ QQAMQEQIGL GDDSSENQSS FANRTAIQAE TEDDDDGIEG EDDEDNDDGW 120 ATEETQNLLR IRSEMHLKFR DSNLQAVAWE DVSRKLAELG YRRSAQACKE KIEQVNLTSD 180 KAKDGKSFML FGELEAVCNG GSRVNNGGAT NAALPEEVPA KPEQKNKEKK KKKSSWILX |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Psi.14703 | 0.0 | shoot |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G33240.1 | 3e-20 | GT-2-like 1 |