PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||||||
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TF ID | Psi004158 | ||||||||||||
Organism | |||||||||||||
Taxonomic ID | |||||||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family | ERF | ||||||||||||
Protein Properties | Length: 226aa MW: 25683.2 Da PI: 10.5565 | ||||||||||||
Description | ERF family protein | ||||||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 35.5 | 2.6e-11 | 106 | 147 | 3 | 51 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 +GV++ k+ +W A I++ +k+++lg+ g+ eeAa ++++a+ Psi004158 106 MRGVYF--KNMKWQAAIKVE-----KKQIHLGTVGSQEEAAHLYDRAAF 147 79**98..47*********6.....6********************985 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF00847 | 2.9E-5 | 105 | 148 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 3.1E-4 | 105 | 162 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.5E-7 | 106 | 150 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 3.1E-6 | 108 | 152 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 226 aa Download sequence Send to blast |
MVSIRRRKHL VLSPGTNTYL VQLARLNETC EVAQRSTENA KLNFVRPMFL NDAGGQKQVL 60 EPSLGSSNVS GCSSSKESKP QNSGHEIKRR KRQRRKQFDN QEPCLMRGVY FKNMKWQAAI 120 KVEKKQIHLG TVGSQEEAAH LYDRAAFMCG REPNFELSEE EKQELSRFNW EQFLEITRNA 180 ITSKKHQKKL EAGLRKKQLN HAQASQQAVK AQAPTVQAAD AGVSNF |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010242670.1 | 9e-77 | PREDICTED: ethylene-responsive transcription factor-like protein At4g13040 isoform X2 | ||||
Refseq | XP_019051495.1 | 9e-77 | PREDICTED: ethylene-responsive transcription factor-like protein At4g13040 isoform X2 | ||||
Refseq | XP_019051496.1 | 9e-77 | PREDICTED: ethylene-responsive transcription factor-like protein At4g13040 isoform X2 | ||||
TrEMBL | A9NNY9 | 1e-167 | A9NNY9_PICSI; Uncharacterized protein | ||||
STRING | XP_010242670.1 | 3e-76 | (Nelumbo nucifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G13040.1 | 6e-47 | ERF family protein |