PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.8G265900.2.p
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 240aa    MW: 27387.4 Da    PI: 6.4263
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.8G265900.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.59e-313593259
                        --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                WRKY  2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
                        +D ++WrKYGqK++kgs++pr+YYrC+++ gC++kk+vers++d +v++itY+++Hnh+
  Prupe.8G265900.2.p 35 SDSWSWRKYGQKPIKGSPYPRGYYRCSTSkGCSAKKQVERSKTDASVLIITYTSSHNHP 93
                        69************************9988****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.4E-312895IPR003657WRKY domain
SuperFamilySSF1182906.67E-263195IPR003657WRKY domain
SMARTSM007741.7E-353494IPR003657WRKY domain
PROSITE profilePS5081131.2953595IPR003657WRKY domain
PfamPF031068.5E-263693IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    Send to blast
MKPSRQNQTQ KFQKNSGQKV RHPKEGKLKN EGPPSDSWSW RKYGQKPIKG SPYPRGYYRC  60
STSKGCSAKK QVERSKTDAS VLIITYTSSH NHPGPDVSTT NLTQLQPSTE DHNLPALLPK  120
QEEQEKEQEE KQGKLEDHPA MKTDHEDHFH YIQSPIRSSQ NIMIDQEEDP FLEKTHVSST  180
LGFLLDEEPL SYSQLMSFST PKSEENDFFD ELEELPTFSS FPSFMRSNLS LERIPSVPS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B1e-2135951779Disease resistance protein RRS1
5w3x_D1e-2135951779Disease resistance protein RRS1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.8G265900.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankDQ1803065e-78DQ180306.1 Fragaria x ananassa clone PBCESTFXA1 SSR marker.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007201365.11e-157probable WRKY transcription factor 69 isoform X1
TrEMBLA0A251N3T71e-176A0A251N3T7_PRUPE; Uncharacterized protein
STRINGEMJ025641e-157(Prunus persica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29280.13e-34WRKY DNA-binding protein 65