PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.8G189400.1.p
Common NamePRUPE_ppa002636mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 651aa    MW: 74371 Da    PI: 8.6927
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.8G189400.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding28.43.9e-09593637345
                         SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
     Myb_DNA-binding   3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 
                          W++  +  lv+a k ++++   +W+++a+ ++ g+t +qck ++ 
  Prupe.8G189400.1.p 593 VWSAVQERALVQALKTFPKEasqRWERVAAAVP-GKTVNQCKKKFT 637
                         6********************************.*********986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.287.1103.7E-2192197IPR001623DnaJ domain
SuperFamilySSF465651.09E-1994202IPR001623DnaJ domain
SMARTSM002712.5E-1395170IPR001623DnaJ domain
PROSITE profilePS5007618.4196178IPR001623DnaJ domain
PfamPF002268.9E-1896175IPR001623DnaJ domain
CDDcd062572.44E-1296167IPR001623DnaJ domain
PRINTSPR006252.5E-8101119IPR001623DnaJ domain
PRINTSPR006252.5E-8119134IPR001623DnaJ domain
PRINTSPR006252.5E-8150170IPR001623DnaJ domain
PROSITE patternPS006360155174IPR018253DnaJ domain, conserved site
PROSITE profilePS512935.956458513IPR017884SANT domain
SMARTSM007171.4E-4459512IPR001005SANT/Myb domain
SuperFamilySSF466899.72E-7461504IPR009057Homeodomain-like
CDDcd001670.0046462502No hitNo description
PROSITE profilePS512939.991589644IPR017884SANT domain
SMARTSM007174.3E-9590642IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.606.1E-6590640IPR009057Homeodomain-like
SuperFamilySSF466896.36E-9592647IPR009057Homeodomain-like
PfamPF002491.8E-7593637IPR001005SANT/Myb domain
CDDcd001671.20E-6594640No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 651 aa     Download sequence    Send to blast
MNVPSKFRLI SYSQELVDGQ PVYVSSNCLP VKALKLEPAG HSFHAVALKL LGCVEEEKDA  60
DVQKVVNDKE PTSIPSFDSY SSKGKKKSGA EGKQQDHYAL LGLSHLRYLA TEEQIRKSYR  120
ETALKYHPDK QAALLLNEET EAAKQTKKDE IESHFKSIQE AYEALIDPVK RRIYDSTDEF  180
DDEIPTDCAP QDFFKVFGPA FMRNGRWSVN QPIPFLGDEN TPLKEVDSFY DFWYTFKSWR  240
EFPHTDEFDL EQAESRDHKR WMERQNAKLS EKARKEEYAR IRTLVDNAYK RDPRIVRRKE  300
AEKAEKQRKK EAKYLAKKLQ EEEAARAVEE EKRRKEEEEK RAAGIALQQK KLKEKEKKLL  360
RKERSRLRTL SGPVISNRLL SLAEDDVESL CMSLDIEQLR NICERMEGKE GLERAEVLRD  420
ACGYKNDLEG KKEDEKKTLQ QNGSVETNGT VLLGSYEKKE KPWSREEIEL LRKGMLKFPK  480
GTSRRWEVVS DYIGTGRSVE EILKATKTVL LQKPDSSKAF DSFLEKRKPT PSIASPLTTR  540
IEVEGVLTPP QGTETPAEKV DKSSESSSGS TKDQNPNDPI AENGVSSGSE QDVWSAVQER  600
ALVQALKTFP KEASQRWERV AAAVPGKTVN QCKKKFTLLK ESFRNKKSSA *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5dje_A3e-1919229520123Zuotin
5dje_B3e-1919229520123Zuotin
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ppe.11770.0fruit
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.8G189400.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007199733.10.0dnaJ homolog subfamily C member 2
TrEMBLM5VIQ80.0M5VIQ8_PRUPE; Uncharacterized protein
STRINGEMJ009320.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF60833348
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G11450.10.0DnaJ domain ;Myb-like DNA-binding domain