PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.8G022200.1.p
Common NamePRUPE_ppa008850mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family Dof
Protein Properties Length: 318aa    MW: 35045 Da    PI: 4.4793
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.8G022200.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof119.61.2e-373488660
              zf-Dof  6 lkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60
                         +cprC s+ntkfCyynnyslsqPryfCk+CrryWtkGG+lrnvPvGgg+rkn++
  Prupe.8G022200.1.p 34 PNCPRCASSNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNRR 88
                        58***************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074784.0E-301888IPR003851Zinc finger, Dof-type
PfamPF027017.7E-323488IPR003851Zinc finger, Dof-type
PROSITE profilePS5088428.6683488IPR003851Zinc finger, Dof-type
PROSITE patternPS0136103672IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    Send to blast
MFSAPVEQML QCPSGAFIMM DKRSWNKPHI EVAPNCPRCA SSNTKFCYYN NYSLSQPRYF  60
CKGCRRYWTK GGSLRNVPVG GGCRKNRRGK AAKLSQADRA SLSYFNHNSS SSDDTSGQYS  120
SGTDNQPGGG NGSDIDLAAV FAKFLNNNSS SPADEHDHLD QDHEPNLVIS SSELNDVDGS  180
QNSSRADQDL VEAVDHLLGG LVAPDHQHQQ IQEENVQSFM GINHDEQDDM NIHEFGLQGL  240
LGNDDQVVQD VFWSDDAATT SSLTSSTASF SWQPMVHLQE LDYSLPSDDD HMNIPTNLCS  300
DNWSSFDFSG FEVFSRS*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.8G022200.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007200433.10.0dof zinc finger protein DOF1.2
TrEMBLM5VKJ50.0M5VKJ5_PRUPE; Uncharacterized protein
STRINGEMJ016320.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF18173394
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21340.11e-42Dof family protein