PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.7G201600.1.p
Common NamePRUPE_ppa017136mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family MYB
Protein Properties Length: 324aa    MW: 36200.5 Da    PI: 6.8723
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.7G201600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding491.4e-151461148
                        TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
     Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                        +g+WT+ Ed+ l +++k++G g+W+  +++ g++R++k+c++rw++yl
  Prupe.7G201600.1.p 14 KGAWTAHEDKVLSEYIKLHGEGRWRNLPKKAGLKRCGKSCRLRWLNYL 61
                        79********************************************97 PP
2Myb_DNA-binding53.17.3e-1767111147
                         TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
     Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                         rg+ +++E+el+++++k+lG++ W++Ia +++ gRt++++k++w++ 
  Prupe.7G201600.1.p  67 RGNISPDEEELIIRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNTN 111
                         7899******************.*********.***********986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129416.381961IPR017930Myb domain
SuperFamilySSF466894.21E-2812108IPR009057Homeodomain-like
SMARTSM007178.2E-131363IPR001005SANT/Myb domain
PfamPF002491.6E-131461IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.8E-221568IPR009057Homeodomain-like
CDDcd001675.48E-101661No hitNo description
PROSITE profilePS5129425.67462116IPR017930Myb domain
SMARTSM007175.3E-1666114IPR001005SANT/Myb domain
PfamPF002494.4E-1567112IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.6E-2469116IPR009057Homeodomain-like
CDDcd001672.95E-1271112No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006633Biological Processfatty acid biosynthetic process
GO:0006970Biological Processresponse to osmotic stress
GO:0010023Biological Processproanthocyanidin biosynthetic process
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    Send to blast
MGRSACCAKE GLNKGAWTAH EDKVLSEYIK LHGEGRWRNL PKKAGLKRCG KSCRLRWLNY  60
LRPDIKRGNI SPDEEELIIR LHKLLGNRWS LIAGRLPGRT DNEIKNYWNT NLGKKIQDQQ  120
RQGSASNLKH HNKNGEPVSK KAKTMEDMSP NMTSPSPSKM SPVVRTKAAK CTKVFINPDP  180
HKLPLGHQHC EEDNRGGLMF DRHAGDDHTN NGSSSLSSFS NIADEENSSS DFLVDFDMNE  240
ISLASLLNSD FPAINCDDVD QNRDNSLSHC VDQTAQIFSE EMLQHLNVGS HDCVQVQPNL  300
VLNFHSLTSF LDGDQGGEEW LGE*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1h8a_C8e-261211625128MYB TRANSFORMING PROTEIN
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.7G201600.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007204546.10.0transcription factor MYB6
TrEMBLM5WG390.0M5WG39_PRUPE; Uncharacterized protein
STRINGEMJ057450.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3134817
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G35550.19e-62MYB family protein