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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Prupe.7G153700.1.p |
| Common Name | PRUPE_ppa003124mg |
| Organism |
|
| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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| Family |
GRAS |
| Protein Properties |
Length: 602aa MW: 65807.8 Da PI: 5.081 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Prupe.7G153700.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 367 | 2.6e-112 | 231 | 601 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilk 92
++Ll+cA+ ++++d +a + L rl+e +s +gdp++R+ +yfteAL++r+++ + k+l++++t ++ ++ + ++k++++++P+ k
Prupe.7G153700.1.p 231 LKALLDCAR-LAESDPDRAVKSLIRLRESVSDRGDPTERVGFYFTEALQSRVSS--LQSEKSLAATTTYDTACEDFTLSYKALNDACPYSK 318
689******.566699999***********************************..6666778888888888******************* PP
GRAS 93 fshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesg..skeeleetgerLakfAeelgvpfefnv 180
f+hltaNqaIlea+e+++++Hi+Df+i qG+QW+aLlqaLa+R+ g+p ++Ri g+ +p+ g + +l +tg+rL++fA+ l+++fef++
Prupe.7G153700.1.p 319 FAHLTANQAILEATERATKIHIVDFGIVQGVQWAALLQALATRSTGKPsRIRISGIPAPSLGtsPAASLFATGNRLRDFAKLLELNFEFEP 409
********************************************666659*********99999999************************ PP
GRAS 181 lvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsl 271
+ + +++l+ + +rv+p+EalaVnl+lql++llde+ + + + Lkl ksl+Pk+v++ e ea++++ F rf +al+yy+alf+sl
Prupe.7G153700.1.p 410 -ILTPVHELDESCFRVEPDEALAVNLMLQLYNLLDETPTAVQ---SALKLAKSLNPKIVTLGEYEANLSRVGFTSRFKNALKYYTALFESL 496
.799******************************99999998...9********************************************* PP
GRAS 272 eaklpreseerikvErellgreivnvvacegae.rrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslv.l 360
e ++ r+s er kvE+ llgr+i vv e+ +rer e +e+W+ +e++GF+pv+ls++a++qak ll ++++ y++ e+ ++ l
Prupe.7G153700.1.p 497 EPNMTRDSPERLKVEKLLLGRRIGGVVGPEQPGtKRERFEDKEQWKYLMESSGFEPVALSHYAVSQAKILLWNYNNSLYSLIESPPGFLsL 587
*****************************998769****************************************999999888666666* PP
GRAS 361 gWkdrpLvsvSaWr 374
W++ pL++vS+Wr
Prupe.7G153700.1.p 588 AWNEVPLFTVSSWR 601
*************8 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 602 aa
Download sequence Send
to blast |
MAYMCADSGN LMAIAQQVIK QKQQQEQQQQ QHHHHQQQPV GAFSLTPWPN NTHSPNLGYG 60
LTGSGYTDPF QLSGSSDAGG EPGFPFPNLD HHPTGFRFSD LGGGGAAEFD SDEWMDSIIG 120
GGDSTDSSNL PSACDTWHGS NADFGLYGAD PFQPPCPSRL SNPCSPPSDL NRVIFSETQN 180
QLPAWTAPPP PPPAPHVVVK QAKSADPPPQ PNEAVGVSSR SPEIESAPPL LKALLDCARL 240
AESDPDRAVK SLIRLRESVS DRGDPTERVG FYFTEALQSR VSSLQSEKSL AATTTYDTAC 300
EDFTLSYKAL NDACPYSKFA HLTANQAILE ATERATKIHI VDFGIVQGVQ WAALLQALAT 360
RSTGKPSRIR ISGIPAPSLG TSPAASLFAT GNRLRDFAKL LELNFEFEPI LTPVHELDES 420
CFRVEPDEAL AVNLMLQLYN LLDETPTAVQ SALKLAKSLN PKIVTLGEYE ANLSRVGFTS 480
RFKNALKYYT ALFESLEPNM TRDSPERLKV EKLLLGRRIG GVVGPEQPGT KRERFEDKEQ 540
WKYLMESSGF EPVALSHYAV SQAKILLWNY NNSLYSLIES PPGFLSLAWN EVPLFTVSSW 600
R*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor involved in plant development (By similarity). Involved in environmental abiotic stress resistance. May increase the expression of stress-responsive genes (PubMed:20616154). Binds DNA in vitro (By similarity). {ECO:0000250|UniProtKB:Q53K16, ECO:0000250|UniProtKB:Q9SCR0, ECO:0000269|PubMed:20616154}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Up-regulated by drought and high salt stresses, and down-regulated by gibberellic acid (GA) treatment, but not by plant hormone abscisic acid (ABA) application in leaves. Under the salt treatment, expression is induced quickly, and it peaks at 3 hours. Under the drought treatment, the expression is not induced immediately, but reaches its maximum at 3 hours. Under the GA treatment, the expression becomes weaker within 5 hours. {ECO:0000269|PubMed:20616154}. |
