PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.7G075800.1.p
Common NamePRUPE_ppa023366mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 706aa    MW: 78308.6 Da    PI: 8.1554
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.7G075800.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding34.93.6e-113687348
                        SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT......TTS-HHHHHHHHHHHT CS
     Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmg......kgRtlkqcksrwqkyl 48
                        +W t+E++ll++av+++G+ +W+++a ++         +t+  ck ++q+++
  Prupe.7G075800.1.p 36 SWGTWEELLLACAVHRFGTQSWDAVATELRkrssnlHLLTPHACKRKFQDLR 87
                        7**********************************9889**********986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007178.5E-43389IPR001005SANT/Myb domain
PfamPF002491.0E-103586IPR001005SANT/Myb domain
CDDcd001676.50E-53686No hitNo description
Gene3DG3DSA:1.20.920.104.3E-15320457IPR001487Bromodomain
SMARTSM002972.0E-13334444IPR001487Bromodomain
SuperFamilySSF473701.83E-16336439IPR001487Bromodomain
CDDcd043694.54E-15345439No hitNo description
PfamPF004399.7E-10352429IPR001487Bromodomain
PROSITE profilePS5001411.892353425IPR001487Bromodomain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 706 aa     Download sequence    Send to blast
MNVKSVVAEG SCDNGLSDYM IFLMDKPNFP EKQTPSWGTW EELLLACAVH RFGTQSWDAV  60
ATELRKRSSN LHLLTPHACK RKFQDLRRRF SQNDAASGKD DDTPPIPWLD QLRQRRLDEL  120
RRELQRYDHS IVSLQLKVER LKEVREQSLR ETEKPVEKSD LEKTEEEEIE HKDAEPVDNS  180
PEKKGISGEV SEHDDRSCNE SNTTDPKHEI PETEVADADK GSGQTEPAGE EIEPVEKLDN  240
PVVEDSCNGS SDSVVKETAV VEAEKGNSGE LKESVAESKG REEEGTKESP SNSEVQSSAS  300
LSRKLGQEPK PGGPGGPDRP EEPSEPDQED ESPAMKGVPV ESQPLAEFLG ILRSHKFASF  360
FERRLHSQET PIYKNMIRQH VDFELVQTRL EGGRYEPCSR FLFFRDLLLI CNNAIVFFGK  420
KSPEYKAACE LQLLVSKEMV LQAPKQDPPP KEETPKPPAP PLNQDPETSD SLLAKSKLSL  480
PLNACRKRSS ITARASTTSS SGPDRKKEQI TTSFRDVKPA ISWKQKEESS DEVEKLHVTK  540
KRRKERLRSS SRNNSSKNGR SHGNTNNDRN SEANDGFSSR VVTSNENSES KAETEKKSNT  600
NSSGKKRSAA DFLSRMKRSS TSKTGLSAET SKTPDNNSRG GRAEQRKNGN GKGNAQKDQG  660
SRRGSGGRQA AKEQGSPTKR SVGRPSKRAA APATAGPAKR TRQRG*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1539543KKRRK
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ppe.50050.0fruit
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.7G075800.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007202007.20.0uncharacterized protein LOC18769143
TrEMBLA0A251N8620.0A0A251N862_PRUPE; Uncharacterized protein
STRINGEMJ032060.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF18702972
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57980.17e-61DNA-binding bromodomain-containing protein