PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.7G073000.1.p | ||||||||
Common Name | PRUPE_ppa003825mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | bZIP | ||||||||
Protein Properties | Length: 547aa MW: 61473.8 Da PI: 7.137 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 34.7 | 3.9e-11 | 253 | 293 | 5 | 45 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 k rr+++NReAAr+sR+RKka++++Le+ +L++ ++L Prupe.7G073000.1.p 253 KTLRRLAQNREAARKSRLRKKAYVQQLETSRIKLTQLEQEL 293 7789************************8766666655544 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.1E-8 | 246 | 295 | No hit | No description |
SMART | SM00338 | 4.9E-8 | 249 | 321 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.243 | 251 | 295 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 4.29E-7 | 253 | 295 | No hit | No description |
Pfam | PF00170 | 2.7E-8 | 253 | 293 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14708 | 1.89E-21 | 253 | 305 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 256 | 271 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 3.0E-32 | 344 | 417 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 547 aa Download sequence Send to blast |
MGFSREFNFA EDEEEEKGEQ ILLETRLLAS ARTSSAFMAS SIQGNNQLEQ QQQQQQQHHH 60 HHQQQHHQIQ DHHHHQHQQQ QQIQYGMMQS SSSNIPAGNF ISKDSGAYDL GELDQALFLY 120 LDGQSQDHHN SSSTATTTTT HHLHQDTQRH HQNNSLSGMR PPTLNIFPSQ PMHVEPPSTK 180 AAGTGLVSPA AMSGSKRPSE PSMELANPRK DASAPAPSSR PQEPAKAIKR EGNRKGPTTS 240 SSEQEGPKTP DPKTLRRLAQ NREAARKSRL RKKAYVQQLE TSRIKLTQLE QELQRARSQG 300 MFFGGGIVGG DQQGLPLGMN SISSDAAVFD IEYARWQEEH HRLMCELRAA VQEHLPENEL 360 RLFVDNCLAH YDEVMNLKSM VAKTDVFHIV SGMWKTPAER CFMWMGGFRP SEVIKIILNQ 420 IEPLTEQQLL GICGLRQSTQ EAEEALSQGL EALNQSLSDT ITSDSLSCPP NMANYMGQMA 480 IAMNKLSTLE GFVRQADNLR HQTIHRLQQI LTTRQAARCL LAMAEYFHRL RALSSLWMGR 540 PRQDQS* |
Expression -- Description ? help Back to Top | ||||||
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Source | Description | |||||
Uniprot | TISSUE SPECIFICITY: Specifically expressed in roots. {ECO:0000269|PubMed:12777042}. |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00491 | DAP | Transfer from AT5G06839 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.7G073000.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_007204568.1 | 0.0 | bZIP transcription factor TGA10 isoform X1 | ||||
Refseq | XP_020423302.1 | 0.0 | bZIP transcription factor TGA10 isoform X1 | ||||
Swissprot | Q52MZ2 | 0.0 | TGA10_TOBAC; bZIP transcription factor TGA10 | ||||
TrEMBL | M5VWI1 | 0.0 | M5VWI1_PRUPE; Uncharacterized protein | ||||
STRING | EMJ05767 | 0.0 | (Prunus persica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF4731 | 34 | 55 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06839.3 | 0.0 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Prupe.7G073000.1.p |
Entrez Gene | 18769573 |