PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.7G070200.1.p
Common NamePRUPE_ppa007919mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 352aa    MW: 38826.8 Da    PI: 6.6559
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.7G070200.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.21.4e-08196243455
                         HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                 HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         +h+ +Er RR++iN ++  L+el+P +    +k    a +L + +++++sLq
  Prupe.7G070200.1.p 196 NHSLAERARREKINARMKLLQELVPGC----NKISGTALVLDEIINHVQSLQ 243
                         79************************9....888999999999999999998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000835.35E-9190247No hitNo description
SuperFamilySSF474592.62E-15190261IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.0E-14192260IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.469192242IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.0E-6196243IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.9E-8198248IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 352 aa     Download sequence    Send to blast
MDPTGATVPG SILPGPEFES LQFREEIHRL MAVPPENASS FTALLELPPT QAMELLHLSP  60
EANSTPTPVA ISGEVRVQHP FNSSLTFPTN PALIERAAKF SIFAGEGSPE TSSIPSNSGA  120
DLEKVKTEPV ETDSNPNSSQ LTLDATKNNQ RSSAKRKERE KKVKVSTKKS KSEIKEDANK  180
VPYVHVRARR GQATDNHSLA ERARREKINA RMKLLQELVP GCNKISGTAL VLDEIINHVQ  240
SLQRQVEFLS MRLAAVNPRI DFNLDSILAA ESGSLMEANF ANMVTPLMWP EVPINGNRQP  300
YHQQWHFNTH HPGWGREEET HTFITPETSL ISCDSSANSA TLQTSHLKME M*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ppe.136691e-131fruit
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Expressed in leaves, stems, and flowers. {ECO:0000269|PubMed:12679534}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.7G070200.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007204902.10.0transcription factor bHLH48
SwissprotQ8VZ021e-103BH048_ARATH; Transcription factor bHLH48
TrEMBLM5VYC80.0M5VYC8_PRUPE; Uncharacterized protein
STRINGEMJ061010.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF49852945
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42300.11e-103bHLH family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Li Y,Wang H,Li X,Liang G,Yu D
    Two DELLA-interacting proteins bHLH48 and bHLH60 regulate flowering under long-day conditions in Arabidopsis thaliana.
    J. Exp. Bot., 2017. 68(11): p. 2757-2767
    [PMID:28591805]