PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.7G064600.2.p
Common NamePRUPE_ppa009186mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 271aa    MW: 31094.6 Da    PI: 9.4839
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.7G064600.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B344.82.3e-1411683596
                        EEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
                  B3 35 tltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96
                        + tl+d+sg  W+v l  + +++r+++ +GW++Fvk++ L+   ++vF +dg+s+f   v++
  Prupe.7G064600.2.p 11 KCTLRDPSGDCWTVGL--EVRGDRFFFHEGWQRFVKDHSLEIANVLVFDYDGKSKF--DVTL 68
                        679*************..*********************************99988..5555 PP
2B357.62.2e-18152246699
                         ..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE.....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
                  B3   6 tpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy...rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                         ++++  ++ r+ +pk+ a + g++   +k +++ed++g sW+vkl+    + ++gr ++tkGW+e + an++  gD++vF+l++ + + ++
  Prupe.7G064600.2.p 152 IRAMRKNRYRMNFPKELAVAKGLIR--KKSVRVEDPHGISWDVKLRLdekEHNGGRLLMTKGWSECCYANNISLGDTLVFELVNAMHGGMK 240
                         5566778899************995..557***************99877777778***************************999999** PP

                         EEEE-S CS
                  B3  94 vkvfrk 99 
                         +++fr 
  Prupe.7G064600.2.p 241 MHIFRG 246
                         ***996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5086312.887172IPR003340B3 DNA binding domain
SMARTSM010190.0045272IPR003340B3 DNA binding domain
SuperFamilySSF1019364.32E-16670IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.101.6E-16671IPR015300DNA-binding pseudobarrel domain
PfamPF023622.5E-111166IPR003340B3 DNA binding domain
CDDcd100171.31E-121370No hitNo description
Gene3DG3DSA:2.40.330.106.5E-17145246IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019361.35E-16145247IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086312.393147247IPR003340B3 DNA binding domain
CDDcd100172.16E-15150245No hitNo description
SMARTSM010192.3E-9151247IPR003340B3 DNA binding domain
PfamPF023624.8E-16152246IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    Send to blast
MYHVNGRLSP KCTLRDPSGD CWTVGLEVRG DRFFFHEGWQ RFVKDHSLEI ANVLVFDYDG  60
KSKFDVTLYD PIGSEKELEP AKKRRGNRAR VKEEIIELDT EEPDKDSEED ARMSNIRKRK  120
SFKSGKRIAR TDGGNETSNA PIVFRSKHLC FIRAMRKNRY RMNFPKELAV AKGLIRKKSV  180
RVEDPHGISW DVKLRLDEKE HNGGRLLMTK GWSECCYANN ISLGDTLVFE LVNAMHGGMK  240
MHIFRGNSYV VLDASCVKYQ GYVVENLALQ *
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18191KKRRGNRARVK
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ppe.193950.0fruit
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.7G064600.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankFM2535631e-157FM253563.1 Prunus cerasifera BAC insert containing Ma gene, resistant Ma1 allele, clone 76H19.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007202358.10.0putative B3 domain-containing protein At5g66980
TrEMBLA0A251N7L90.0A0A251N7L9_PRUPE; Uncharacterized protein
TrEMBLM5VQI50.0M5VQI5_PRUPE; Uncharacterized protein
STRINGEMJ035570.0(Prunus persica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.11e-14B3 family protein