PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.7G023300.1.p | ||||||||
Common Name | PRUPE_ppa009512mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | G2-like | ||||||||
Protein Properties | Length: 290aa MW: 31486.3 Da PI: 8.4471 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 105.6 | 2.8e-33 | 46 | 100 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+rlrWt++LH+rFv+a++qLGG+++AtPk +l++m+v+gLt++hvkSHLQkYRl Prupe.7G023300.1.p 46 KQRLRWTSDLHDRFVDAITQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRL 100 79****************************************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 11.884 | 43 | 103 | IPR017930 | Myb domain |
Gene3D | G3DSA:1.10.10.60 | 4.2E-32 | 44 | 101 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 3.76E-17 | 45 | 100 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 4.7E-26 | 46 | 101 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 1.5E-7 | 48 | 99 | IPR001005 | SANT/Myb domain |
Pfam | PF14379 | 1.6E-24 | 132 | 178 | IPR025756 | MYB-CC type transcription factor, LHEQLE-containing domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 290 aa Download sequence Send to blast |
MYHAKKFSTA SLVPHKPQSS EELANVGVVS GGSSVKSPTP SGGSGKQRLR WTSDLHDRFV 60 DAITQLGGPD RATPKGVLRV MGVPGLTIYH VKSHLQKYRL AKYLPESPAD GSKDEKKGSG 120 DSLSCSDSSP GVQINEALRM QMEVQKRLHE QLEVQRQLQM RIEAQGKYLQ KIIEEQEKLG 180 GVLKGSDALP SAEDKQKPSQ LETAGDASAT PSSPRKKQRV DDGLPDGCTT SNVPPKADQK 240 NEFVGQWDRD LYGSDGGFGF NLQREFKERD GDAAQKAPME LDPLCGSKQ* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4k_A | 2e-23 | 45 | 103 | 1 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 2e-23 | 45 | 103 | 1 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 2e-23 | 45 | 103 | 1 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 2e-23 | 45 | 103 | 1 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 2e-23 | 45 | 103 | 1 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 2e-23 | 45 | 103 | 1 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 2e-23 | 45 | 103 | 1 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 2e-23 | 45 | 103 | 1 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.7G023300.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | FR828552 | 0.0 | FR828552.1 Rosa hybrid cultivar mRNA for putative MYB transcription factor (myb1 gene), cultivar Yellow Island. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_007202402.1 | 0.0 | myb family transcription factor PHL7 isoform X1 | ||||
Refseq | XP_020424093.1 | 0.0 | myb family transcription factor PHL7 isoform X1 | ||||
Swissprot | Q9SJW0 | 2e-73 | PHL7_ARATH; Myb family transcription factor PHL7 | ||||
TrEMBL | M5VRH6 | 0.0 | M5VRH6_PRUPE; Uncharacterized protein | ||||
STRING | EMJ03601 | 0.0 | (Prunus persica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF13013 | 23 | 30 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G01060.1 | 2e-69 | G2-like family protein |
Link Out ? help Back to Top | |
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Phytozome | Prupe.7G023300.1.p |
Entrez Gene | 18769160 |