PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.6G295100.1.p
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 334aa    MW: 37222 Da    PI: 6.3204
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.6G295100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY77.21.9e-24150210259
                         --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
                WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                         dDg++WrKYGqK+++++++pr+Y+rCt++   +C+++k+v++  +dp v+ +tY g+H+++
  Prupe.6G295100.1.p 150 DDGHAWRKYGQKVIHNANHPRNYFRCTHKfdqSCQATKHVQQIVDDPPVFRTTYYGNHTCR 210
                         8***************************9999**************************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.6E-25135210IPR003657WRKY domain
SuperFamilySSF1182908.89E-24142210IPR003657WRKY domain
PROSITE profilePS5081120.472144207IPR003657WRKY domain
SMARTSM007747.9E-36149211IPR003657WRKY domain
PfamPF031069.5E-24150210IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    Send to blast
MELSWPESVL SNRERVMEEL IQGRELASQL CRVLDDHKST LVSGCGGGDV GSAEGLVTKI  60
LGSFANTLLI LNGKEADGEI VSGDRIQGNS SGGGSADSSS WDANHAIIKS EDFHEEISCK  120
SASTFKDRRG SYKRRKTSHS WTRDTPALTD DGHAWRKYGQ KVIHNANHPR NYFRCTHKFD  180
QSCQATKHVQ QIVDDPPVFR TTYYGNHTCR DYLKASELIF DCTSHTESSS YIRFGDIKQD  240
HPFFSSFTSV KKEVVVKEEK PQPSDEHLMA SHHHNRSSSG DYNVSPHPTA FKSSCPLSGL  300
SSTIDPYDHE GDVMSGLIVG PYYFDDEVLQ YEF*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A9e-23150210969OsWRKY45
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.6G295100.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020420606.10.0probable WRKY transcription factor 70
TrEMBLA0A251NXF10.0A0A251NXF1_PRUPE; Uncharacterized protein
STRINGXP_008244778.10.0(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF19953486
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.11e-30WRKY DNA-binding protein 70