PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.6G284400.2.p
Common NamePRUPE_ppa022996mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 460aa    MW: 51852.3 Da    PI: 4.2271
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.6G284400.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.63.7e-191269155
                 AP2  1 sgykGVrwdkkrgrWvAeIrdpse.ng...krkrfslgkfgtaeeAakaaiaarkkleg 55
                        + y+GVr++  +g+WvAeIr+p++  g   k+ r +lg+f ta++Aa a+++a+++++g
  Prupe.6G284400.2.p 12 CVYRGVRQRT-WGKWVAEIREPNNfSGvskKNSRLWLGTFPTAYDAAFAYDEAARAMYG 69
                        68*****999.***********9988899566***********************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008474.0E-121269IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.9E-291378IPR001471AP2/ERF domain
SuperFamilySSF541714.64E-191378IPR016177DNA-binding domain
PROSITE profilePS5103222.0491377IPR001471AP2/ERF domain
SMARTSM003801.9E-331383IPR001471AP2/ERF domain
CDDcd000185.94E-281477No hitNo description
PRINTSPR003674.9E-91425IPR001471AP2/ERF domain
PRINTSPR003674.9E-94359IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 460 aa     Download sequence    Send to blast
MKGKGGPENS DCVYRGVRQR TWGKWVAEIR EPNNFSGVSK KNSRLWLGTF PTAYDAAFAY  60
DEAARAMYGG LARLNFPQNT MKLKEYSNSV YSGTTKTTTS SSYESSTTYN NGDEAEGLDM  120
SSKCAMESSR FVVGKSKESY DFFEDCVHKE PKQETDCSVG FASQDLEVLD ATLREAKDVK  180
CELETEYELA RNDAEETSVF QTGSYESFNH RPDYLHNELQ VVNLDSVPDG KPYYNDWESL  240
ETFLRSNNDY LNNELVDAEC NGRNDCNPSE DVNVEKPVTS EAMEKEFPMI LESGSHNGLD  300
DSCHYMHNEQ TNVASNLVTA DFEPSNDEIK RSMTDQELRG GLVETTNLNG HNGFIDSYAC  360
LDDIRPSNDI KMQENRLANL HNWSVEESYG IDAQNQQGER LPNLPNQSQT QPQGNIPGRL  420
AHTEEASLDI DFDVDLFRQN YDSGVLEEQV FHGSWFPYS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A3e-181477360ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.6G284400.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007208591.20.0uncharacterized protein LOC18773985
TrEMBLA0A251NWY20.0A0A251NWY2_PRUPE; Uncharacterized protein
TrEMBLM5WSK10.0M5WSK1_PRUPE; Uncharacterized protein (Fragment)
STRINGEMJ097900.0(Prunus persica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38340.12e-22ERF family protein