PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.6G244300.4.p
Common NamePRUPE_ppa005152mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 415aa    MW: 44826.4 Da    PI: 8.6145
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.6G244300.4.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY104.75e-33195251360
                         -SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
                WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                         DgynWrKYGqK+vkgse+prsYY+Ct+++Cpvkkkvers  d+++ ei+Y+geHnh+k
  Prupe.6G244300.4.p 195 DGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKKVERSL-DGQIAEIVYKGEHNHSK 251
                         9***************************************.***************85 PP
2WRKY322.5e-10395414322
                         -SS-EEEEEEE--TT-SS-E CS
                WRKY   3 DgynWrKYGqKevkgsefpr 22 
                         Dg++WrKYGqK+vkg+++pr
  Prupe.6G244300.4.p 395 DGFRWRKYGQKVVKGNPYPR 414
                         9******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.6E-30182252IPR003657WRKY domain
SuperFamilySSF1182903.27E-26190252IPR003657WRKY domain
SMARTSM007743.8E-37193251IPR003657WRKY domain
PROSITE profilePS5081123.686195252IPR003657WRKY domain
PfamPF031061.3E-25195249IPR003657WRKY domain
Gene3DG3DSA:2.20.25.806.2E-11380414IPR003657WRKY domain
SuperFamilySSF1182902.62E-8387414IPR003657WRKY domain
PROSITE profilePS5081114.297388414IPR003657WRKY domain
PfamPF031062.7E-6395414IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009957Biological Processepidermal cell fate specification
GO:0010214Biological Processseed coat development
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 415 aa     Download sequence    Send to blast
MDIKEAERVV IAKPVASRPT CSSFRSFTEL LAGAIDASPS NISSETAVPA IRPKTVRFKP  60
TVNHAVSGLV SSQAEMSGTA HSNSSEKISK SDSRASVVYK PLAKVVSRAT VSALANMGNF  120
NTSHQSTQSS VEAGVLQQNQ DKCFRSQLSP NLRHNNPSCA ETNQTTEPLK IASQNVEEDP  180
KHIPSTANTD RPSYDGYNWR KYGQKQVKGS EYPRSYYKCT HPNCPVKKKV ERSLDGQIAE  240
IVYKGEHNHS KPQPPKKSSS GTQGLGIASD GTGQDTNNRL WNSQLNERNE GSEGRVEDQN  300
EVGLPVHSYQ SKAPLLYDPL ASGGINAGGG TPDNSCGLSG ECEEGSKGPE AEDYEPRSKR  360
RKSENQSNEG GISGEGVPDP RVVVQSSVDS DMTGDGFRWR KYGQKVVKGN PYPR*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A3e-181952521674WRKY transcription factor 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.6G244300.4.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ0201090.0KJ020109.1 Malus hybrid cultivar TTG2 protein (TTG2) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007205137.10.0WRKY transcription factor 44
RefseqXP_020422895.10.0WRKY transcription factor 44
RefseqXP_020422896.10.0WRKY transcription factor 44
TrEMBLA0A251NV720.0A0A251NV72_PRUPE; Uncharacterized protein
TrEMBLM5VZ010.0M5VZ01_PRUPE; Uncharacterized protein
STRINGEMJ063360.0(Prunus persica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37260.17e-88WRKY family protein