PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.6G093400.1.p
Common NamePRUPE_ppb017789mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family C2H2
Protein Properties Length: 304aa    MW: 34280.3 Da    PI: 8.1645
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.6G093400.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.81.9e-05112134123
                         EEETTTTEEESSHHHHHHHHHHT CS
             zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                         ++C++C+k F+++ +L  H+ +H
  Prupe.6G093400.1.p 112 FSCHICKKIFPSRKSLYGHMGSH 134
                         89******************887 PP
2zf-C2H211.20.0012215237123
                         EEETTTTEEESSHHHHHHHHHHT CS
             zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                         ++C++C k F++   L  H r H
  Prupe.6G093400.1.p 215 HTCNICYKKFPTGQALGGHKRAH 237
                         79*************99999988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501579.4325885IPR007087Zinc finger, C2H2
SMARTSM003551.85880IPR015880Zinc finger, C2H2-like
PfamPF139129.1E-85876IPR007087Zinc finger, C2H2
SuperFamilySSF576672.05E-65980No hitNo description
PROSITE patternPS0002806080IPR007087Zinc finger, C2H2
SuperFamilySSF576672.05E-6107134No hitNo description
SMARTSM003550.0037112134IPR015880Zinc finger, C2H2-like
PfamPF139120.0011112136IPR007087Zinc finger, C2H2
PROSITE profilePS501579.702112139IPR007087Zinc finger, C2H2
PROSITE patternPS000280114134IPR007087Zinc finger, C2H2
SMARTSM003550.84215237IPR015880Zinc finger, C2H2-like
PfamPF139123.7E-10215238IPR007087Zinc finger, C2H2
PROSITE profilePS501578.974215237IPR007087Zinc finger, C2H2
PROSITE patternPS000280217237IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    Send to blast
MKNFREEDRE YDAVRDEHQV LSEDTKQGVV HGFDDSKGKE VALRSLNCEN YQDPDRSRIC  60
NVCGKRFGSG QALGGHISVH FEPRLGPKKM NNKFKVTKQH QLQYYPSLDN KFSCHICKKI  120
FPSRKSLYGH MGSHSRRVRS PSFSSSSSST SSSAECNDLD LKEQDCDRVK FLPGWAKEDR  180
GDMKIANQTP NYNNDFARKY NKFPSSKRLK FLDGHTCNIC YKKFPTGQAL GGHKRAHYFD  240
GAQPVLEAPP PATVKVASTD DHDDGETIDP VDSSPLMQLA EQALHLASRR ILDLDLNEPP  300
KEE*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.6G093400.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008225096.21e-178PREDICTED: uncharacterized protein LOC103324763
TrEMBLM5WFV60.0M5WFV6_PRUPE; Uncharacterized protein
STRINGEMJ081430.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF16199410
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56200.12e-09C2H2 family protein