PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.6G073500.1.p
Common NamePRUPE_ppa014789mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 695aa    MW: 78198.1 Da    PI: 6.3369
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.6G073500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS380.52e-1163216902372
                GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilk 92 
                          +lL+ecA+av s d++ a++lL+++++++sp+g+++qRla+yf+e+L+arla+  s  y  l   +t   +++e l+a+++++ ++P+ k
  Prupe.6G073500.1.p 321 CKLLTECAQAVGSYDQQSASELLKQIRQHSSPYGSATQRLAHYFAEGLEARLAGARSLSYPPLLFMHT---STTEFLKAYQVYVSACPFKK 408
                         589***************************************************66555655555555...59****************** PP

                GRAS  93 fshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvl 181
                         + h+ aN++I++ +e+++r+HiiDf+is+GlQW++L+q+L+++++gpp+lRiT+++ p++g   +e++eetg+rLak+ ++  vpfe+nv 
  Prupe.6G073500.1.p 409 MFHFFANRTIMKQTEKATRLHIIDFGISYGLQWACLIQSLSEKTGGPPNLRITAIELPQPGfrPAERIEETGRRLAKYSKRYSVPFEYNV- 498
                         ************************************************************9****************************9. PP

                GRAS 182 vakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsle 272
                         +ak++e+++leeL+++++E+++Vn++++l++++de+v ++++rd+vL+l+k+++P+++ +   +  +n++ F++rf + l ++ alfd++e
  Prupe.6G073500.1.p 499 IAKKWETIRLEELQIDRNEVIVVNCMHRLKQIPDETVMMNNPRDAVLNLIKRINPDLFMHGVVNGTYNAPAFVTRFKQLLFHFHALFDMYE 589
                         7****************************************************************************************** PP

                GRAS 273 aklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgW 362
                         a++pr++e+r + Er+++g +ivnv+aceg er+er et+++W++r  +aGF+++pl+ +  k++k++l++++  + + +e++ +++++gW
  Prupe.6G073500.1.p 590 ATVPRDNEHRLWFERAIFGTDIVNVIACEGLERVERPETYKQWQARYVRAGFRQLPLDRELLKKMKTMLKMMGyHKDFGIENDGEWMLQGW 680
                         *************************************************************************9999************** PP

                GRAS 363 kdrpLvsvSa 372
                         k+r ++++Sa
  Prupe.6G073500.1.p 681 KGRIIIALSA 690
                         ********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5098564.834294671IPR005202Transcription factor GRAS
PfamPF035146.9E-114321690IPR005202Transcription factor GRAS
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
Sequence ? help Back to Top
Protein Sequence    Length: 695 aa     Download sequence    Send to blast
MEELNFGHGS NSVSSDQNLV NGLQVNHEPT NKLLLPANLD RPNDSSTSSE GDTVDGTDCN  60
LPVLKYISDI LLEEDLEGKP CMLEDILGLQ AAEKSFYDAL NQMNPPLPNH PSFSVYQSFE  120
NSDSGFQSSN GSISGFQSSN GSIAAKTGSV WDFSETSHVQ TSPVESLSDI TLVSDSFSNM  180
QCLGNSRGVG EGNEIIDLEG YQCMPPSPDT LYRNLASVPE NYGYNSTNGS KGKKNRQRED  240
GHYTEEGRSN KQSAAFADDS DPQEMFDKVL QGVNPESESC FHDESLNAEG TRKLQHNKQS  300
KGSKTTCSKK PNSNRQVVDL CKLLTECAQA VGSYDQQSAS ELLKQIRQHS SPYGSATQRL  360
AHYFAEGLEA RLAGARSLSY PPLLFMHTST TEFLKAYQVY VSACPFKKMF HFFANRTIMK  420
QTEKATRLHI IDFGISYGLQ WACLIQSLSE KTGGPPNLRI TAIELPQPGF RPAERIEETG  480
RRLAKYSKRY SVPFEYNVIA KKWETIRLEE LQIDRNEVIV VNCMHRLKQI PDETVMMNNP  540
RDAVLNLIKR INPDLFMHGV VNGTYNAPAF VTRFKQLLFH FHALFDMYEA TVPRDNEHRL  600
WFERAIFGTD IVNVIACEGL ERVERPETYK QWQARYVRAG FRQLPLDREL LKKMKTMLKM  660
MGYHKDFGIE NDGEWMLQGW KGRIIIALSA LKPA*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5b3g_A1e-4332669325380Protein SCARECROW
5b3h_A1e-4332669324379Protein SCARECROW
5b3h_D1e-4332669324379Protein SCARECROW
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.6G073500.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007207997.10.0scarecrow-like protein 30
TrEMBLM5W7A20.0M5W7A2_PRUPE; Uncharacterized protein
STRINGEMJ091960.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF13134339
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G29060.11e-171GRAS family protein