PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.6G073300.1.p
Common NamePRUPE_ppa021807mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 687aa    MW: 77912 Da    PI: 4.9545
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.6G073300.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS364.11.9e-1113226843374
                GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                         +lL++cA+av+s d + a++ L ++++++sp+gd +qRla+y++++L+ rla         l+p+     + ++ l a++++  ++P++k+
  Prupe.6G073300.1.p 322 TLLTQCAQAVASYDIRTANEQLRQIRQHSSPYGDGTQRLAHYLANGLELRLAA-----GVPLNPKM----SAADLLRAYQTYITACPFHKM 403
                         69**************************************************9.....33344444....479****************** PP

                GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlv 182
                         s++ aN++I + +e+++r+HiiDf++ +G QWp+L+q L++R +gpp+lRiTgv+ p++g   +e++e+tg+rLa+++e+++vpfe+nv +
  Prupe.6G073300.1.p 404 SNFYANRTIAKLAEKATRLHIIDFGVLYGYQWPCLIQGLSNRHGGPPTLRITGVEFPQPGfrPSERVEATGRRLANYCERFKVPFEYNV-I 493
                         ***********************************************************9****************************9.7 PP

                GRAS 183 akrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdslea 273
                         ak++e++++e+++++++E ++Vn+ ++l++l+de+v+ +  rd+vLkl+++++P+++++   + ++n++ F +rf eal ++s+lfd++e+
  Prupe.6G073300.1.p 494 AKNWETIQYEDIKIDRDELIVVNCLYRLKNLPDETVTDSP-RDTVLKLIRRINPDIFIHGVVNGSYNAPFFDTRFREALFHFSSLFDMFEE 583
                         ********************************99888777.************************************************** PP

                GRAS 274 klpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkd 364
                         +lpre+++r   E+e++gr++ nv+aceg++r+er et+++W+ r ++aGF+++pl++++ k++++++   + + + v+e+  ++++gWk+
  Prupe.6G073300.1.p 584 TLPREDQQRLLFEKEVFGRDVINVIACEGSRRFERPETYKQWQFRNKRAGFRQLPLDQEILKKVRSMVTSEYHKDFVVDEDGMWVLQGWKG 674
                         ********************************************************************9999888**************** PP

                GRAS 365 rpLvsvSaWr 374
                         r + ++S W+
  Prupe.6G073300.1.p 675 RIIHAISYWK 684
                         *********8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5098563.933294664IPR005202Transcription factor GRAS
PfamPF035146.6E-109322684IPR005202Transcription factor GRAS
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
Sequence ? help Back to Top
Protein Sequence    Length: 687 aa     Download sequence    Send to blast
MDTFLDEIPS SMNKFIFDQG SVPAYSDQNI VTEFEADHDF TDPSFFLVNP DPSSDFSSLS  60
GFSSEVDSPD SQSSNAILKY ISEMLMEEEL ENKPCMLQDC LALQAAEKSL HDVLVQEYPS  120
SANSLLTSVY QNVENPDEGS NHSSNGSVAA SNWVGSDWDC VQDVFQSSHI QISATESPAY  180
TLLVPNREGQ IIDVESSSSF PIEPRELAKD VSFNSVQDGS SSPSGSRSKK NRQREDDDDL  240
DEGRSNKQSA VYADESELPE LFDKVLLCQG EKQESQSCSP QESEHKEGSG KLQLNRKSRG  300
SKGKNTRKKK PDDNTGGVDL WTLLTQCAQA VASYDIRTAN EQLRQIRQHS SPYGDGTQRL  360
AHYLANGLEL RLAAGVPLNP KMSAADLLRA YQTYITACPF HKMSNFYANR TIAKLAEKAT  420
RLHIIDFGVL YGYQWPCLIQ GLSNRHGGPP TLRITGVEFP QPGFRPSERV EATGRRLANY  480
CERFKVPFEY NVIAKNWETI QYEDIKIDRD ELIVVNCLYR LKNLPDETVT DSPRDTVLKL  540
IRRINPDIFI HGVVNGSYNA PFFDTRFREA LFHFSSLFDM FEETLPREDQ QRLLFEKEVF  600
GRDVINVIAC EGSRRFERPE TYKQWQFRNK RAGFRQLPLD QEILKKVRSM VTSEYHKDFV  660
VDEDGMWVLQ GWKGRIIHAI SYWKPV*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5b3g_A2e-453006851380Protein SCARECROW
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1295310RKSRGSKGKNTRKKKP
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.6G073300.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007206627.10.0scarecrow-like protein 30
TrEMBLM5W3910.0M5W391_PRUPE; Uncharacterized protein
STRINGEMJ078260.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF13134339
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G29060.10.0GRAS family protein