PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.6G041700.1.p
Common NamePRUPE_ppa023474mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 848aa    MW: 91942.3 Da    PI: 4.5071
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.6G041700.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding29.81.4e-09797845247
                         SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS
     Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 
                         +rW+  E++ l  +v+++G g+Wk I +      + Rt+ ++k++w++ 
  Prupe.6G041700.1.p 797 KRWSLLEEDTLRTGVQKYGAGNWKFILNSYReifEERTEVDLKDKWRNM 845
                         69*********************************************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129412.494791847IPR017930Myb domain
SuperFamilySSF466891.63E-13793846IPR009057Homeodomain-like
SMARTSM007170.002795847IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.609.4E-11797847IPR009057Homeodomain-like
CDDcd116604.47E-19797847No hitNo description
PfamPF002496.3E-8797845IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009751Biological Processresponse to salicylic acid
GO:0009753Biological Processresponse to jasmonic acid
GO:0009901Biological Processanther dehiscence
GO:0010152Biological Processpollen maturation
GO:0043067Biological Processregulation of programmed cell death
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 848 aa     Download sequence    Send to blast
MDSDVDVSRW VLELLIRDRE KECIAKRVLA VAPFSDQDYR LKKTVLLRTI ECDVYDALVS  60
ETMLETLEMI EDLDLSQGIA TTDSMKAAYL AVATECTVKF LVGLMGKPSG KYLEAVDRIW  120
RGRVGALERS ETSQLISAEL RQRMDEVEAG VWDLRVSKKL SRMNTRNDAL RLVAVYVKEA  180
LALMGPPFIT WAVRLNVPKE VADLEGDQIA VAKEANVGGG PEAEAQTKNG ANVGDRSELE  240
AQTENGANAG DGSELEAQMA NAADVGGESE LEAQMENGAN VGGESELEAQ MENGDNVQMA  300
SGTNAVDGSE LEKEVVNETN AGDGSQLELQ TTNGTNAAVE SVLEVQMVSG ANVGDGSELE  360
AHTVNATNVG SESELEAQLV NVTNLGDGCE LQAQRVNEAS GSCGFESGPQ PMTGVQLREV  420
GARRMPPTMS RDLVLNEMDS GFTNREVLRF GDDQVHDTGV GLPSTNRELV LSLDPTTKDK  480
EIQRSTGLRY KHLAHRRTRG PVRIRDAEDL GTDLSNSKYD SLSTPEVSNA QEALRSSILE  540
LQAVVTDPLP DALRVAETIR LDLAMKSVNA GAENLSVEKG AGPVQSHNDN LGNMSVPQSS  600
GKEKDVPTPP VNQGKGTESV QTDDANLGNP SSSNKNNAPR PMTDPLPDAL RVAETIRLDL  660
AMKSVNVGAE NLSVEIGAGP VQSHNDNLGN VSVPQSSGKE KDVPNPPVNQ GKGTESVQTD  720
DVNLGNPSSS NKNNAPRPSL MERNTTAHTY EWDDSIDTSQ GAMKDPGRLY LPSPKRNAVS  780
PLKKYENKRF TKRRKAKRWS LLEEDTLRTG VQKYGAGNWK FILNSYREIF EERTEVDLKD  840
KWRNMTR*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.6G041700.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020422770.10.0uncharacterized protein LOC18775002 isoform X1
TrEMBLA0A251NLT40.0A0A251NLT4_PRUPE; Uncharacterized protein
STRINGEMJ082910.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF28243260
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G06910.11e-18TRF-like 7