PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Prupe.6G018200.2.p

Common Name

PRUPE_ppa003113mg

Organism

Prunus persica

Taxonomic ID

3760

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus

Family

EIL

Protein Properties

Length: 602aa MW: 67448.3 Da PI: 5.4356

Description

EIL family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Prupe.6G018200.2.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	EIN3	443.1	2.4e-135	37	388	1	325
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsL 91 eel+krmwkd+++lkrlke++kq+le+++a ++++k +++++qarrkkmsraQDgiLkYMlk mevc+a+GfvYgiipekgkpv+gasd++ Prupe.6G018200.2.p 37 EELEKRMWKDRIKLKRLKEKEKQKLEAQQA-AEKQKPKQTSDQARRKKMSRAQDGILKYMLKLMEVCKARGFVYGIIPEKGKPVSGASDNI 126 8**********************99998.99****************************************************** PP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHH CS EIN3 92 raWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwg 182 raWWkekv+fd+ngpaai+ky+a+++++s+++++ ++ ++++ l++lqD+tlgSLLs+lmqhcdppqr++plekg +pPWWPtG+e+ww Prupe.6G018200.2.p 127 RAWWKEKVKFDKNGPAAIAKYEAECIAMSDADNS--RNGNSQSILQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGNPPPWWPTGNEDWWL 215 *************************99988..78999999******************************************* PP HHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXX........ CS EIN3 183 elglskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahss........ 265 +lgl + q+ ppykkphdlkk+wkv+vLtavikhmsp+i++ir+++rqsk+lqdkm+akes+++l vl++ee+++++ s+++ Prupe.6G018200.2.p 216 KLGLLHGQS-PPYKKPHDLKKMWKVGVLTAVIKHMSPDIAKIRRHVRQSKCLQDKMTAKESAIWLGVLSREESLIRQPSSDNGtsgitetp 305 ****9.9******************************************************************4445687777 PP XXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXX.......................XXXXXXXXXXXXXXXXXXXXX.. CS EIN3 266 slrkqspkvtlsceqkedvegkkeskikhvqavktta.......................gfpvvrkrkkkpsesakvsskev 325 +++++ ++ +s+++++dv+g+++ + ++++++++ + + + +rk+++++ + v++ + Prupe.6G018200.2.p 306 QSSRGGKQAAVSSNSDYDVDGTDDGVGSVSSKDDRRNqpmdlepssnicnntpnhvqdkeQSEKQPRRKRPRVRARPVEQLPA 388 66669999999*******888888888888888778999999999999988888888878888888887777777765544 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04873	9.7E-127	37	286	No hit	No description
Gene3D	G3DSA:1.10.3180.10	4.5E-71	161	294	IPR023278	Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamily	SSF116768	2.35E-61	167	289	IPR023278	Ethylene insensitive 3-like protein, DNA-binding domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0042762	Biological Process	regulation of sulfur metabolic process
GO:0071281	Biological Process	cellular response to iron ion
GO:0005634	Cellular Component	nucleus
GO:0003677	Molecular Function	DNA binding
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 602 aa Download sequence Send to blast
MGDVEEVGPD ISSDIEEDLR CENIADKDVS DEEIEAEELE KRMWKDRIKL KRLKEKEKQK 60 LEAQQAAEKQ KPKQTSDQAR RKKMSRAQDG ILKYMLKLME VCKARGFVYG IIPEKGKPVS 120 GASDNIRAWW KEKVKFDKNG PAAIAKYEAE CIAMSDADNS RNGNSQSILQ DLQDATLGSL 180 LSSLMQHCDP PQRKYPLEKG NPPPWWPTGN EDWWLKLGLL HGQSPPYKKP HDLKKMWKVG 240 VLTAVIKHMS PDIAKIRRHV RQSKCLQDKM TAKESAIWLG VLSREESLIR QPSSDNGTSG 300 ITETPQSSRG GKQAAVSSNS DYDVDGTDDG VGSVSSKDDR RNQPMDLEPS SNICNNTPNH 360 VQDKEQSEKQ PRRKRPRVRA RPVEQLPAPS HNENIHLGPR NDLPDINHTD VQMIGFQVHD 420 NQQENGTITT LRPPEKDLDI QAQLPASEFN YYSAVPSDNV ISTQGMHVDG TPMLYHGVQD 480 AEVHRGDTFN VYNPSAEYPP SHDQPPSQIV MNEPQIRPAD GVHIPTVHRN GSEIAGGDLP 540 YYVKDTFQSE QDRTVNANFG SPIDSLSLDY GLFNSPFHFG IDGSGSLDDL ELEEMMEYFA 600 A*

Sequence ? help Back to Top

Protein Sequence Length: 602 aa Download sequence Send to blast

MGDVEEVGPD ISSDIEEDLR CENIADKDVS DEEIEAEELE KRMWKDRIKL KRLKEKEKQK  60
LEAQQAAEKQ KPKQTSDQAR RKKMSRAQDG ILKYMLKLME VCKARGFVYG IIPEKGKPVS  120
GASDNIRAWW KEKVKFDKNG PAAIAKYEAE CIAMSDADNS RNGNSQSILQ DLQDATLGSL  180
LSSLMQHCDP PQRKYPLEKG NPPPWWPTGN EDWWLKLGLL HGQSPPYKKP HDLKKMWKVG  240
VLTAVIKHMS PDIAKIRRHV RQSKCLQDKM TAKESAIWLG VLSREESLIR QPSSDNGTSG  300
ITETPQSSRG GKQAAVSSNS DYDVDGTDDG VGSVSSKDDR RNQPMDLEPS SNICNNTPNH  360
VQDKEQSEKQ PRRKRPRVRA RPVEQLPAPS HNENIHLGPR NDLPDINHTD VQMIGFQVHD  420
NQQENGTITT LRPPEKDLDI QAQLPASEFN YYSAVPSDNV ISTQGMHVDG TPMLYHGVQD  480
AEVHRGDTFN VYNPSAEYPP SHDQPPSQIV MNEPQIRPAD GVHIPTVHRN GSEIAGGDLP  540
YYVKDTFQSE QDRTVNANFG SPIDSLSLDY GLFNSPFHFG IDGSGSLDDL ELEEMMEYFA  600
A*

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1wij_A	3e-75	166	297	9	140	ETHYLENE-INSENSITIVE3-like 3 protein
Search in ModeBase

Expression -- UniGene ? help Back to Top
UniGene ID	E-value	Expressed in
Ppe.19024	0.0	fruit

Functional Description ? help Back to Top
Source	Description
UniProt	Probable transcription factor that may be involved in the ethylene response pathway. {ECO:0000269\|PubMed:9215635, ECO:0000269\|PubMed:9851977}.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00233	DAP	Transfer from AT1G73730	Download

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Prupe.6G018200.2.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	EF031065	0.0	EF031065.1 Prunus persica EIL1 mRNA, complete cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_007208306.1	0.0	ETHYLENE INSENSITIVE 3-like 3 protein
Swissprot	O23116	0.0	EIL3_ARATH; ETHYLENE INSENSITIVE 3-like 3 protein
TrEMBL	M5WRR1	0.0	M5WRR1_PRUPE; Uncharacterized protein
STRING	EMJ09505	0.0	(Prunus persica)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G73730.1	1e-170	ETHYLENE-INSENSITIVE3-like 3

Link Out ? help Back to Top
Phytozome	Prupe.6G018200.2.p
Entrez Gene	18773761

Publications ? help Back to Top
Frerigmann H,Gigolashvili T Update on the role of R2R3-MYBs in the regulation of glucosinolates upon sulfur deficiency. Front Plant Sci, 2014. 5: p. 626 [PMID:25426131] Zheng ZL,Zhang B,Leustek T Transceptors at the boundary of nutrient transporters and receptors: a new role for Arabidopsis SULTR1;2 in sulfur sensing. Front Plant Sci, 2014. 5: p. 710 [PMID:25566284] Panda SK,Sunkar R Nutrient- and other stress-responsive microRNAs in plants: Role for thiol-based redox signaling. Plant Signal Behav, 2015. 10(4): p. e1010916 [PMID:25912823] Wawrzyńska A,Sirko A EIN3 interferes with the sulfur deficiency signaling in Arabidopsis thaliana through direct interaction with the SLIM1 transcription factor. Plant Sci., 2016. 253: p. 50-57 [PMID:27968996]