PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.6G018200.1.p | ||||||||
Common Name | PRUPE_ppa003113mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | EIL | ||||||||
Protein Properties | Length: 602aa MW: 67448.3 Da PI: 5.4356 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 443.1 | 2.4e-135 | 37 | 388 | 1 | 325 |
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsL 91 eel+krmwkd+++lkrlke++kq+le+++a ++++k +++++qarrkkmsraQDgiLkYMlk mevc+a+GfvYgiipekgkpv+gasd++ Prupe.6G018200.1.p 37 EELEKRMWKDRIKLKRLKEKEKQKLEAQQA-AEKQKPKQTSDQARRKKMSRAQDGILKYMLKLMEVCKARGFVYGIIPEKGKPVSGASDNI 126 8************************99998.99********************************************************** PP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHH CS EIN3 92 raWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwg 182 raWWkekv+fd+ngpaai+ky+a+++++s+++++ ++ ++++ l++lqD+tlgSLLs+lmqhcdppqr++plekg +pPWWPtG+e+ww Prupe.6G018200.1.p 127 RAWWKEKVKFDKNGPAAIAKYEAECIAMSDADNS--RNGNSQSILQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGNPPPWWPTGNEDWWL 215 *****************************99988..78999999*********************************************** PP HHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXX........ CS EIN3 183 elglskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahss........ 265 +lgl + q+ ppykkphdlkk+wkv+vLtavikhmsp+i++ir+++rqsk+lqdkm+akes+++l vl++ee+++++ s+++ Prupe.6G018200.1.p 216 KLGLLHGQS-PPYKKPHDLKKMWKVGVLTAVIKHMSPDIAKIRRHVRQSKCLQDKMTAKESAIWLGVLSREESLIRQPSSDNGtsgitetp 305 ********9.9**********************************************************************4445687777 PP XXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXX.......................XXXXXXXXXXXXXXXXXXXXX.. CS EIN3 266 slrkqspkvtlsceqkedvegkkeskikhvqavktta.......................gfpvvrkrkkkpsesakvsskev 325 +++++ ++ +s+++++dv+g+++ + ++++++++ + + + +rk+++++ + v++ + Prupe.6G018200.1.p 306 QSSRGGKQAAVSSNSDYDVDGTDDGVGSVSSKDDRRNqpmdlepssnicnntpnhvqdkeQSEKQPRRKRPRVRARPVEQLPA 388 66669999999*********888888888888888778999999999999988888888878888888887777777765544 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 9.7E-127 | 37 | 286 | No hit | No description |
Gene3D | G3DSA:1.10.3180.10 | 4.5E-71 | 161 | 294 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
SuperFamily | SSF116768 | 2.35E-61 | 167 | 289 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0042762 | Biological Process | regulation of sulfur metabolic process | ||||
GO:0071281 | Biological Process | cellular response to iron ion | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 602 aa Download sequence Send to blast |
MGDVEEVGPD ISSDIEEDLR CENIADKDVS DEEIEAEELE KRMWKDRIKL KRLKEKEKQK 60 LEAQQAAEKQ KPKQTSDQAR RKKMSRAQDG ILKYMLKLME VCKARGFVYG IIPEKGKPVS 120 GASDNIRAWW KEKVKFDKNG PAAIAKYEAE CIAMSDADNS RNGNSQSILQ DLQDATLGSL 180 LSSLMQHCDP PQRKYPLEKG NPPPWWPTGN EDWWLKLGLL HGQSPPYKKP HDLKKMWKVG 240 VLTAVIKHMS PDIAKIRRHV RQSKCLQDKM TAKESAIWLG VLSREESLIR QPSSDNGTSG 300 ITETPQSSRG GKQAAVSSNS DYDVDGTDDG VGSVSSKDDR RNQPMDLEPS SNICNNTPNH 360 VQDKEQSEKQ PRRKRPRVRA RPVEQLPAPS HNENIHLGPR NDLPDINHTD VQMIGFQVHD 420 NQQENGTITT LRPPEKDLDI QAQLPASEFN YYSAVPSDNV ISTQGMHVDG TPMLYHGVQD 480 AEVHRGDTFN VYNPSAEYPP SHDQPPSQIV MNEPQIRPAD GVHIPTVHRN GSEIAGGDLP 540 YYVKDTFQSE QDRTVNANFG SPIDSLSLDY GLFNSPFHFG IDGSGSLDDL ELEEMMEYFA 600 A* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1wij_A | 3e-75 | 166 | 297 | 9 | 140 | ETHYLENE-INSENSITIVE3-like 3 protein |
Search in ModeBase |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Ppe.19024 | 0.0 | fruit |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor that may be involved in the ethylene response pathway. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00233 | DAP | Transfer from AT1G73730 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.6G018200.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | EF031065 | 0.0 | EF031065.1 Prunus persica EIL1 mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_007208306.1 | 0.0 | ETHYLENE INSENSITIVE 3-like 3 protein | ||||
Swissprot | O23116 | 0.0 | EIL3_ARATH; ETHYLENE INSENSITIVE 3-like 3 protein | ||||
TrEMBL | M5WRR1 | 0.0 | M5WRR1_PRUPE; Uncharacterized protein | ||||
STRING | EMJ09505 | 0.0 | (Prunus persica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF322 | 34 | 200 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G73730.1 | 1e-170 | ETHYLENE-INSENSITIVE3-like 3 |
Link Out ? help Back to Top | |
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Phytozome | Prupe.6G018200.1.p |
Entrez Gene | 18773761 |
Publications ? help Back to Top | |||
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