PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.5G220700.3.p
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 363aa    MW: 40846.7 Da    PI: 4.9565
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.5G220700.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP246.77.7e-15114159352
                 AP2   3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkk 52 
                         ykGVr++k +gr++AeIrdp     + +r +lg+f taeeAa+ + + +++
  Prupe.5G220700.3.p 114 YKGVRRRK-WGRYAAEIRDPI----QrRRKWLGTFATAEEAAAVYQKKKLE 159
                         9****998.**********83....35***************999877765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541714.38E-15112160IPR016177DNA-binding domain
SMARTSM003807.8E-17113183IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.6E-19113160IPR001471AP2/ERF domain
PROSITE profilePS5103218.426113177IPR001471AP2/ERF domain
PRINTSPR003671.5E-7114125IPR001471AP2/ERF domain
PfamPF008473.8E-8114152IPR001471AP2/ERF domain
PRINTSPR003671.5E-7136152IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 363 aa     Download sequence    Send to blast
MPGFKTLVLN QHVKLNKLKT KQPNKEENTS SVKRIRIIYN DPDATDSSSD DEEYDGKEDR  60
LLHDKRFVSE ILVVDTKYES SADVLSHCKT NRGKIGVSMN FYDSKKTKRS SSMYKGVRRR  120
KWGRYAAEIR DPIQRRRKWL GTFATAEEAA AVYQKKKLEF DSIQSLGKTQ RDYQNLQLSD  180
KDKGAFESFQ LTERTKHEFQ GIPLSEESQD SSGDAAIETF SAEEAERVFC HPSPSSVLEI  240
SGTASLGIGL KQAKEESSVE VFGGEGSVQP CFEEELSILK FPVQPMLPLD IKQLDLGCGE  300
NYVFSSLDQF FDGMSDIVDY PAFNDGNGEV ICLPALDSDF GQQDFAWIDQ KPEHGMPMKF  360
CS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1114120KGVRRRK
2118137RRKWGRYAAEIRDPIQRRRK
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.5G220700.3.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT3695520.0KT369552.1 Prunus pseudocerasus AP2/EREBP family transcription factor-like protein 20 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020420006.10.0ethylene-responsive transcription factor ERF118 isoform X2
RefseqXP_020420007.10.0ethylene-responsive transcription factor ERF118 isoform X2
TrEMBLA0A251PC300.0A0A251PC30_PRUPE; Uncharacterized protein
STRINGEMJ102030.0(Prunus persica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.12e-27cytokinin response factor 4