PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.4G267700.1.p
Common NamePRUPE_ppa005223mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family HB-other
Protein Properties Length: 492aa    MW: 55483.4 Da    PI: 7.8894
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.4G267700.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox60.23.3e-192075257
                        T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
            Homeobox  2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57
                        +kR   t+ ql +Le+++++++yp++e++ + A++lgL+e+q++ WF+ rR k+k+
  Prupe.4G267700.1.p 20 KKRKLKTPAQLMALEKFYNEHKYPTEEMKSQVAEQLGLSEKQISGWFCHRRLKDKR 75
                        89****************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.603.4E-21275IPR009057Homeodomain-like
PROSITE profilePS5007117.1351676IPR001356Homeobox domain
SuperFamilySSF466891.2E-171884IPR009057Homeodomain-like
SMARTSM003892.6E-191880IPR001356Homeobox domain
PfamPF000461.1E-162075IPR001356Homeobox domain
CDDcd000865.35E-172075No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 492 aa     Download sequence    Send to blast
MEESNELHSE ENKTSQDNNK KRKLKTPAQL MALEKFYNEH KYPTEEMKSQ VAEQLGLSEK  60
QISGWFCHRR LKDKRLSRDE TCANGRQDRS SGVIQDRASG LGQDSCGSTK HGDHRYVDPR  120
EVESRRLSGH DFPAADITRE YRSHYTERVG GMDNTSSESS SSLQDRFFTQ NDDPYDVETS  180
RYLAHNGVFS PINSRATENM AYKPSGYLKV KGEAENAAIT AVKRQLGRHY QEDGPPLGVE  240
FDLLPPGAFE SPIMDSVHEP SIVGNPVLRS PDISGVKGQL SPRTRYEVYN SKFSSQDSYI  300
QQENPCIMHG FDLQEKKSSK KLRQKSTYLN HTNSSPGKNS SLDIYDKSVG GTSAYNTNRK  360
DKMRSKRGYS GRKVTSEQTE PCLHEYDRVS SPKLVQRSDY LKPKPSSSIE ENLDGECKAM  420
KVYSNPLRVM MNSTDEMVVA KQARVNLPQR DYSTNSFPQL PPRKNQIKGT AMEMPSSFSE  480
DETAETNSSV D*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.4G267700.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007213878.20.0uncharacterized protein LOC18780090
TrEMBLA0A251PSY10.0A0A251PSY1_PRUPE; Uncharacterized protein
STRINGXP_008227678.10.0(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF57923051
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G03250.11e-100HB-other family protein